Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
MT-CO1P00395 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-CO1P00395 AL049840.3-201ENST00000602669 611 ntBASIC17.87■□□□□ 0.45
MT-CO1P00395 AC064862.7-201ENST00000604520 867 ntBASIC17.87■□□□□ 0.45
MT-CO1P00395 AL139288.1-201ENST00000623748 933 ntBASIC17.87■□□□□ 0.45
MT-CO1P00395 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.87■□□□□ 0.45
MT-CO1P00395 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MT-CO1P00395 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MT-CO1P00395 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-CO1P00395 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MT-CO1P00395 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
MT-CO1P00395 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-CO1P00395 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-CO1P00395 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-CO1P00395 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO1P00395 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
MT-CO1P00395 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.86■□□□□ 0.45
MT-CO1P00395 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MT-CO1P00395 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO1P00395 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO1P00395 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MT-CO1P00395 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.86■□□□□ 0.45
MT-CO1P00395 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MT-CO1P00395 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MT-CO1P00395 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
MT-CO1P00395 SPDYE21P-201ENST00000413323 827 ntBASIC17.86■□□□□ 0.45
MT-CO1P00395 AL031284.1-201ENST00000419297 478 ntBASIC17.86■□□□□ 0.45
MT-CO1P00395 RPS2P1-201ENST00000434010 821 ntBASIC17.86■□□□□ 0.45
MT-CO1P00395 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MT-CO1P00395 AC073648.2-201ENST00000510116 352 ntBASIC17.86■□□□□ 0.45
MT-CO1P00395 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.86■□□□□ 0.45
MT-CO1P00395 AC025062.2-201ENST00000605477 670 ntBASIC17.86■□□□□ 0.45
MT-CO1P00395 AC073592.4-201ENST00000623827 446 ntBASIC17.86■□□□□ 0.45
MT-CO1P00395 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MT-CO1P00395 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.86■□□□□ 0.45
MT-CO1P00395 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO1P00395 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.86■□□□□ 0.45
MT-CO1P00395 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO1P00395 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.86■□□□□ 0.45
MT-CO1P00395 AC148477.5-201ENST00000625164 1645 ntBASIC17.86■□□□□ 0.45
MT-CO1P00395 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO1P00395 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO1P00395 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO1P00395 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO1P00395 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO1P00395 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO1P00395 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.86■□□□□ 0.45
MT-CO1P00395 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.86■□□□□ 0.45
MT-CO1P00395 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.85■□□□□ 0.45
MT-CO1P00395 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.85■□□□□ 0.45
MT-CO1P00395 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.85■□□□□ 0.45
MT-CO1P00395 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
MT-CO1P00395 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 MTDHP4-201ENST00000600287 670 ntBASIC17.85■□□□□ 0.45
MT-CO1P00395 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO1P00395 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.85■□□□□ 0.45
MT-CO1P00395 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-CO1P00395 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.84■□□□□ 0.45
MT-CO1P00395 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MT-CO1P00395 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MT-CO1P00395 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms