Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.11■□□□□ 0.01
DHFRP00374 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.11■□□□□ 0.01
DHFRP00374 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.11■□□□□ 0.01
DHFRP00374 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.11■□□□□ 0.01
DHFRP00374 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.11■□□□□ 0.01
DHFRP00374 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.11■□□□□ 0.01
DHFRP00374 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.11■□□□□ 0.01
DHFRP00374 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.11■□□□□ 0.01
DHFRP00374 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
DHFRP00374 RN7SL471P-201ENST00000580476 299 ntBASIC15.11■□□□□ 0.01
DHFRP00374 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.11■□□□□ 0.01
DHFRP00374 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.11■□□□□ 0.01
DHFRP00374 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
DHFRP00374 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.11■□□□□ 0.01
DHFRP00374 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
DHFRP00374 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
DHFRP00374 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
DHFRP00374 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DHFRP00374 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.1■□□□□ 0.01
DHFRP00374 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.1■□□□□ 0.01
DHFRP00374 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.1■□□□□ 0.01
DHFRP00374 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 KRT8P50-201ENST00000562022 1438 ntBASIC15.1■□□□□ 0.01
DHFRP00374 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
DHFRP00374 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 PAUPAR-201ENST00000630360 2965 ntBASIC15.1■□□□□ 0.01
DHFRP00374 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.1■□□□□ 0.01
DHFRP00374 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.1■□□□□ 0.01
DHFRP00374 AL136379.1-201ENST00000623471 2642 ntBASIC15.1■□□□□ 0.01
DHFRP00374 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
DHFRP00374 DUTP2-201ENST00000519164 463 ntBASIC15.1■□□□□ 0.01
DHFRP00374 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.1■□□□□ 0.01
DHFRP00374 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.1■□□□□ 0.01
DHFRP00374 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
DHFRP00374 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
DHFRP00374 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.1■□□□□ 0.01
DHFRP00374 AC124016.1-201ENST00000609552 612 ntBASIC15.1■□□□□ 0.01
DHFRP00374 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 AC073648.6-201ENST00000641589 218 ntBASIC15.1■□□□□ 0.01
DHFRP00374 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.1■□□□□ 0.01
DHFRP00374 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.1■□□□□ 0.01
DHFRP00374 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.1■□□□□ 0.01
DHFRP00374 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.1■□□□□ 0.01
DHFRP00374 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DHFRP00374 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
DHFRP00374 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
DHFRP00374 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
DHFRP00374 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
DHFRP00374 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms