Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.5■□□□□ 0.23
CLPTM1O96005 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.5■□□□□ 0.23
CLPTM1O96005 LINC00304-203ENST00000565008 1864 ntBASIC16.5■□□□□ 0.23
CLPTM1O96005 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.5■□□□□ 0.23
CLPTM1O96005 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLPTM1O96005 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.5■□□□□ 0.23
CLPTM1O96005 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLPTM1O96005 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 AC024909.3-201ENST00000611513 2257 ntBASIC16.49■□□□□ 0.23
CLPTM1O96005 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 HLA-J-201ENST00000462773 1622 ntBASIC16.49■□□□□ 0.23
CLPTM1O96005 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.49■□□□□ 0.23
CLPTM1O96005 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.49■□□□□ 0.23
CLPTM1O96005 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CLPTM1O96005 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
CLPTM1O96005 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.49■□□□□ 0.23
CLPTM1O96005 BX088651.1-201ENST00000540551 451 ntBASIC16.49■□□□□ 0.23
CLPTM1O96005 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.49■□□□□ 0.23
CLPTM1O96005 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.49■□□□□ 0.23
CLPTM1O96005 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CLPTM1O96005 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.49■□□□□ 0.23
CLPTM1O96005 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 KRT8P41-201ENST00000533985 1514 ntBASIC16.49■□□□□ 0.23
CLPTM1O96005 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLPTM1O96005 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.49■□□□□ 0.23
CLPTM1O96005 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CLPTM1O96005 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.48■□□□□ 0.23
CLPTM1O96005 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.48■□□□□ 0.23
CLPTM1O96005 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.48■□□□□ 0.23
CLPTM1O96005 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
CLPTM1O96005 AL390955.1-201ENST00000428694 934 ntBASIC16.48■□□□□ 0.23
CLPTM1O96005 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.48■□□□□ 0.23
CLPTM1O96005 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.48■□□□□ 0.23
CLPTM1O96005 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.48■□□□□ 0.23
CLPTM1O96005 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.48■□□□□ 0.23
CLPTM1O96005 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CLPTM1O96005 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.48■□□□□ 0.23
CLPTM1O96005 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.48■□□□□ 0.23
CLPTM1O96005 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLPTM1O96005 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.48■□□□□ 0.23
CLPTM1O96005 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
CLPTM1O96005 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLPTM1O96005 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLPTM1O96005 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CLPTM1O96005 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.47■□□□□ 0.23
CLPTM1O96005 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.47■□□□□ 0.23
CLPTM1O96005 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLPTM1O96005 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLPTM1O96005 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLPTM1O96005 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.47■□□□□ 0.23
CLPTM1O96005 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.47■□□□□ 0.23
CLPTM1O96005 MIR1238-201ENST00000408483 83 ntBASIC16.47■□□□□ 0.23
CLPTM1O96005 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.47■□□□□ 0.23
CLPTM1O96005 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.47■□□□□ 0.23
CLPTM1O96005 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.47■□□□□ 0.23
CLPTM1O96005 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.47■□□□□ 0.23
CLPTM1O96005 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLPTM1O96005 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CLPTM1O96005 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms