Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLIC3O95833 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLIC3O95833 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLIC3O95833 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLIC3O95833 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.12■□□□□ 0.17
CLIC3O95833 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLIC3O95833 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.12■□□□□ 0.17
CLIC3O95833 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.12■□□□□ 0.17
CLIC3O95833 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.12■□□□□ 0.17
CLIC3O95833 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLIC3O95833 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.12■□□□□ 0.17
CLIC3O95833 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.12■□□□□ 0.17
CLIC3O95833 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.12■□□□□ 0.17
CLIC3O95833 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLIC3O95833 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CLIC3O95833 CR769767.2-201ENST00000622735 460 ntBASIC16.12■□□□□ 0.17
CLIC3O95833 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.12■□□□□ 0.17
CLIC3O95833 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLIC3O95833 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.12■□□□□ 0.17
CLIC3O95833 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.12■□□□□ 0.17
CLIC3O95833 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLIC3O95833 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.12■□□□□ 0.17
CLIC3O95833 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.12■□□□□ 0.17
CLIC3O95833 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLIC3O95833 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CLIC3O95833 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.12■□□□□ 0.17
CLIC3O95833 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.11■□□□□ 0.17
CLIC3O95833 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.11■□□□□ 0.17
CLIC3O95833 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CLIC3O95833 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.11■□□□□ 0.17
CLIC3O95833 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLIC3O95833 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CLIC3O95833 AC144831.1-201ENST00000573312 2656 ntBASIC16.11■□□□□ 0.17
CLIC3O95833 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 AL353807.1-201ENST00000427475 662 ntBASIC16.11■□□□□ 0.17
CLIC3O95833 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.11■□□□□ 0.17
CLIC3O95833 RNA5SP413-201ENST00000516373 109 ntBASIC16.11■□□□□ 0.17
CLIC3O95833 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.11■□□□□ 0.17
CLIC3O95833 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.11■□□□□ 0.17
CLIC3O95833 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CLIC3O95833 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.11■□□□□ 0.17
CLIC3O95833 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CLIC3O95833 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC3O95833 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC3O95833 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC3O95833 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC3O95833 AC005052.1-201ENST00000625181 2492 ntBASIC16.1■□□□□ 0.17
CLIC3O95833 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CLIC3O95833 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC3O95833 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC3O95833 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC3O95833 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC3O95833 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC3O95833 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CLIC3O95833 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC3O95833 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC3O95833 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC3O95833 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CLIC3O95833 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC3O95833 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CLIC3O95833 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.1■□□□□ 0.17
CLIC3O95833 CA15P1-201ENST00000481698 905 ntBASIC16.1■□□□□ 0.17
CLIC3O95833 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.1■□□□□ 0.17
CLIC3O95833 MIR3180-4-201ENST00000582223 153 ntBASIC16.1■□□□□ 0.17
CLIC3O95833 AF186192.3-201ENST00000583427 947 ntBASIC16.1■□□□□ 0.17
CLIC3O95833 AC073195.1-201ENST00000607241 877 ntBASIC16.1■□□□□ 0.17
CLIC3O95833 AC112497.1-201ENST00000624824 639 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms