Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.51■□□□□ 0.07
CNOT4O95628 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CNOT4O95628 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.51■□□□□ 0.07
CNOT4O95628 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 PRYP5-201ENST00000451909 266 ntBASIC15.51■□□□□ 0.07
CNOT4O95628 AF186996.4-201ENST00000467186 377 ntBASIC15.51■□□□□ 0.07
CNOT4O95628 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.51■□□□□ 0.07
CNOT4O95628 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.51■□□□□ 0.07
CNOT4O95628 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.51■□□□□ 0.07
CNOT4O95628 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.51■□□□□ 0.07
CNOT4O95628 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CNOT4O95628 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CNOT4O95628 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CNOT4O95628 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CNOT4O95628 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CNOT4O95628 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.51■□□□□ 0.07
CNOT4O95628 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.5■□□□□ 0.07
CNOT4O95628 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CNOT4O95628 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.5■□□□□ 0.07
CNOT4O95628 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.5■□□□□ 0.07
CNOT4O95628 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CNOT4O95628 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.5■□□□□ 0.07
CNOT4O95628 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.5■□□□□ 0.07
CNOT4O95628 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.5■□□□□ 0.07
CNOT4O95628 AC003669.1-201ENST00000334569 611 ntBASIC15.5■□□□□ 0.07
CNOT4O95628 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CNOT4O95628 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CNOT4O95628 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CNOT4O95628 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.5■□□□□ 0.07
CNOT4O95628 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.5■□□□□ 0.07
CNOT4O95628 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.5■□□□□ 0.07
CNOT4O95628 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.5■□□□□ 0.07
CNOT4O95628 LINC01451-201ENST00000623792 534 ntBASIC15.5■□□□□ 0.07
CNOT4O95628 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CNOT4O95628 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.5■□□□□ 0.07
CNOT4O95628 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.5■□□□□ 0.07
CNOT4O95628 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CNOT4O95628 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.5■□□□□ 0.07
CNOT4O95628 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CNOT4O95628 AC079776.2-201ENST00000641154 1609 ntBASIC15.5■□□□□ 0.07
CNOT4O95628 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNOT4O95628 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CNOT4O95628 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CNOT4O95628 IL9RP2-201ENST00000423948 1312 ntBASIC15.49■□□□□ 0.07
CNOT4O95628 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.49■□□□□ 0.07
CNOT4O95628 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.49■□□□□ 0.07
CNOT4O95628 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.49■□□□□ 0.07
CNOT4O95628 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CNOT4O95628 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.49■□□□□ 0.07
CNOT4O95628 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CNOT4O95628 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.49■□□□□ 0.07
CNOT4O95628 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.49■□□□□ 0.07
CNOT4O95628 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 RPS2P28-201ENST00000314255 741 ntBASIC15.49■□□□□ 0.07
CNOT4O95628 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 MIR574-201ENST00000385209 96 ntBASIC15.49■□□□□ 0.07
CNOT4O95628 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms