Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.37■□□□□ 0.53
RTN3O95197 AC105339.3-201ENST00000560043 636 ntBASIC18.37■□□□□ 0.53
RTN3O95197 AC006557.2-201ENST00000592985 1240 ntBASIC18.37■□□□□ 0.53
RTN3O95197 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RTN3O95197 AC116407.3-201ENST00000623905 1129 ntBASIC18.37■□□□□ 0.53
RTN3O95197 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN3O95197 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN3O95197 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN3O95197 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN3O95197 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN3O95197 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.37■□□□□ 0.53
RTN3O95197 AC148477.5-201ENST00000625164 1645 ntBASIC18.37■□□□□ 0.53
RTN3O95197 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN3O95197 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
RTN3O95197 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.37■□□□□ 0.53
RTN3O95197 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN3O95197 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN3O95197 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RTN3O95197 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN3O95197 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN3O95197 AC008894.3-201ENST00000624324 3103 ntBASIC18.36■□□□□ 0.53
RTN3O95197 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
RTN3O95197 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.36■□□□□ 0.53
RTN3O95197 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTN3O95197 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTN3O95197 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN3O95197 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN3O95197 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.36■□□□□ 0.53
RTN3O95197 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN3O95197 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.36■□□□□ 0.53
RTN3O95197 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTN3O95197 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RTN3O95197 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTN3O95197 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.36■□□□□ 0.53
RTN3O95197 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.36■□□□□ 0.53
RTN3O95197 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.36■□□□□ 0.53
RTN3O95197 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTN3O95197 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.36■□□□□ 0.53
RTN3O95197 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.36■□□□□ 0.53
RTN3O95197 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
RTN3O95197 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.36■□□□□ 0.53
RTN3O95197 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.36■□□□□ 0.53
RTN3O95197 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN3O95197 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RTN3O95197 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RTN3O95197 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RTN3O95197 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN3O95197 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN3O95197 REXO1L11P-201ENST00000620964 1927 ntBASIC18.35■□□□□ 0.53
RTN3O95197 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 HTR7P1-202ENST00000624664 4411 ntBASIC18.35■□□□□ 0.53
RTN3O95197 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RTN3O95197 NCF1C-201ENST00000438382 1427 ntBASIC18.35■□□□□ 0.53
RTN3O95197 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RTN3O95197 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN3O95197 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RTN3O95197 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.35■□□□□ 0.53
RTN3O95197 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RTN3O95197 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.35■□□□□ 0.53
RTN3O95197 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.35■□□□□ 0.53
RTN3O95197 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN3O95197 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.35■□□□□ 0.53
RTN3O95197 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.35■□□□□ 0.53
RTN3O95197 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
RTN3O95197 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN3O95197 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RTN3O95197 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN3O95197 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN3O95197 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RTN3O95197 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN3O95197 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RTN3O95197 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
RTN3O95197 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
RTN3O95197 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
RTN3O95197 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN3O95197 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTN3O95197 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN3O95197 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN3O95197 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN3O95197 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.34■□□□□ 0.53
RTN3O95197 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN3O95197 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.34■□□□□ 0.53
RTN3O95197 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.34■□□□□ 0.53
RTN3O95197 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN3O95197 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.34■□□□□ 0.53
RTN3O95197 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.34■□□□□ 0.53
RTN3O95197 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms