Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.24■□□□□ 0.19
SOX30O94993 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SOX30O94993 TP73-AS1-210ENST00000637775 1455 ntBASIC16.24■□□□□ 0.19
SOX30O94993 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX30O94993 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX30O94993 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SOX30O94993 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SOX30O94993 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.24■□□□□ 0.19
SOX30O94993 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX30O94993 AP002383.4-201ENST00000442518 975 ntBASIC16.24■□□□□ 0.19
SOX30O94993 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX30O94993 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.24■□□□□ 0.19
SOX30O94993 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX30O94993 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SOX30O94993 AL121894.2-201ENST00000602977 491 ntBASIC16.24■□□□□ 0.19
SOX30O94993 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX30O94993 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.24■□□□□ 0.19
SOX30O94993 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX30O94993 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SOX30O94993 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX30O94993 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX30O94993 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SOX30O94993 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SOX30O94993 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.23■□□□□ 0.19
SOX30O94993 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.23■□□□□ 0.19
SOX30O94993 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SOX30O94993 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX30O94993 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX30O94993 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX30O94993 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 IGHV3-47-201ENST00000425060 335 ntBASIC16.23■□□□□ 0.19
SOX30O94993 TOB2P1-201ENST00000469761 992 ntBASIC16.23■□□□□ 0.19
SOX30O94993 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.23■□□□□ 0.19
SOX30O94993 AC104819.1-201ENST00000504587 486 ntBASIC16.23■□□□□ 0.19
SOX30O94993 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.23■□□□□ 0.19
SOX30O94993 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.23■□□□□ 0.19
SOX30O94993 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.23■□□□□ 0.19
SOX30O94993 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SOX30O94993 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.23■□□□□ 0.19
SOX30O94993 AD001527.2-201ENST00000622994 785 ntBASIC16.23■□□□□ 0.19
SOX30O94993 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SOX30O94993 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX30O94993 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX30O94993 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX30O94993 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX30O94993 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 OR6D1P-203ENST00000641209 4860 ntBASIC16.23■□□□□ 0.19
SOX30O94993 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SOX30O94993 AC080080.1-201ENST00000625121 2420 ntBASIC16.23■□□□□ 0.19
SOX30O94993 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX30O94993 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.22■□□□□ 0.19
SOX30O94993 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 CROCCP2-202ENST00000412962 2773 ntBASIC16.22■□□□□ 0.19
SOX30O94993 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
SOX30O94993 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SOX30O94993 AC141586.5-201ENST00000624546 2050 ntBASIC16.22■□□□□ 0.19
SOX30O94993 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SOX30O94993 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SOX30O94993 INTS4P1-201ENST00000438455 1935 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms