Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLSTN1O94985 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLSTN1O94985 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLSTN1O94985 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLSTN1O94985 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLSTN1O94985 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC19.32■□□□□ 0.68
CLSTN1O94985 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLSTN1O94985 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLSTN1O94985 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.31■□□□□ 0.68
CLSTN1O94985 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CLSTN1O94985 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.31■□□□□ 0.68
CLSTN1O94985 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.31■□□□□ 0.68
CLSTN1O94985 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 HCG4P8-203ENST00000443049 980 ntBASIC19.31■□□□□ 0.68
CLSTN1O94985 MTCL1P1-201ENST00000446207 792 ntBASIC19.31■□□□□ 0.68
CLSTN1O94985 TOB2P1-201ENST00000469761 992 ntBASIC19.31■□□□□ 0.68
CLSTN1O94985 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.31■□□□□ 0.68
CLSTN1O94985 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.31■□□□□ 0.68
CLSTN1O94985 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.31■□□□□ 0.68
CLSTN1O94985 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLSTN1O94985 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.31■□□□□ 0.68
CLSTN1O94985 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.31■□□□□ 0.68
CLSTN1O94985 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
CLSTN1O94985 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLSTN1O94985 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC19.3■□□□□ 0.68
CLSTN1O94985 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLSTN1O94985 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLSTN1O94985 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.3■□□□□ 0.68
CLSTN1O94985 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.3■□□□□ 0.68
CLSTN1O94985 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.3■□□□□ 0.68
CLSTN1O94985 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.3■□□□□ 0.68
CLSTN1O94985 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 AC112698.1-201ENST00000510299 916 ntBASIC19.3■□□□□ 0.68
CLSTN1O94985 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.3■□□□□ 0.68
CLSTN1O94985 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.3■□□□□ 0.68
CLSTN1O94985 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.3■□□□□ 0.68
CLSTN1O94985 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.3■□□□□ 0.68
CLSTN1O94985 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.3■□□□□ 0.68
CLSTN1O94985 AC116407.2-201ENST00000613639 860 ntBASIC19.3■□□□□ 0.68
CLSTN1O94985 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLSTN1O94985 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.3■□□□□ 0.68
CLSTN1O94985 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.3■□□□□ 0.68
CLSTN1O94985 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.3■□□□□ 0.68
CLSTN1O94985 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC19.3■□□□□ 0.68
CLSTN1O94985 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLSTN1O94985 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLSTN1O94985 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.3■□□□□ 0.68
CLSTN1O94985 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLSTN1O94985 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLSTN1O94985 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.29■□□□□ 0.68
CLSTN1O94985 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLSTN1O94985 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLSTN1O94985 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLSTN1O94985 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CLSTN1O94985 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLSTN1O94985 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLSTN1O94985 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLSTN1O94985 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLSTN1O94985 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.29■□□□□ 0.68
CLSTN1O94985 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.29■□□□□ 0.68
CLSTN1O94985 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLSTN1O94985 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms