Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN11O75508 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
CLDN11O75508 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.77■□□□□ 0.43
CLDN11O75508 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.77■□□□□ 0.43
CLDN11O75508 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.77■□□□□ 0.43
CLDN11O75508 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.77■□□□□ 0.43
CLDN11O75508 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
CLDN11O75508 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN11O75508 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN11O75508 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN11O75508 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN11O75508 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN11O75508 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CLDN11O75508 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN11O75508 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN11O75508 AC006504.4-201ENST00000592118 1568 ntBASIC17.76■□□□□ 0.43
CLDN11O75508 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN11O75508 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CLDN11O75508 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN11O75508 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN11O75508 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN11O75508 AC098831.1-202ENST00000438821 336 ntBASIC17.76■□□□□ 0.43
CLDN11O75508 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN11O75508 IGHV3-22-201ENST00000520721 359 ntBASIC17.76■□□□□ 0.43
CLDN11O75508 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN11O75508 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.76■□□□□ 0.43
CLDN11O75508 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN11O75508 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN11O75508 AC120114.3-201ENST00000611923 658 ntBASIC17.76■□□□□ 0.43
CLDN11O75508 AC005593.1-201ENST00000624894 515 ntBASIC17.76■□□□□ 0.43
CLDN11O75508 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN11O75508 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN11O75508 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN11O75508 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN11O75508 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CLDN11O75508 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN11O75508 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN11O75508 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN11O75508 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN11O75508 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN11O75508 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN11O75508 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN11O75508 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN11O75508 ELK2BP-201ENST00000415014 1224 ntBASIC17.75■□□□□ 0.43
CLDN11O75508 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN11O75508 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN11O75508 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN11O75508 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN11O75508 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLDN11O75508 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN11O75508 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLDN11O75508 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN11O75508 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CLDN11O75508 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN11O75508 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CLDN11O75508 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CLDN11O75508 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CLDN11O75508 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLDN11O75508 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN11O75508 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CLDN11O75508 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN11O75508 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN11O75508 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.74■□□□□ 0.43
CLDN11O75508 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLDN11O75508 LINC00896-202ENST00000609602 2128 ntBASIC17.74■□□□□ 0.43
CLDN11O75508 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN11O75508 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN11O75508 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN11O75508 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN11O75508 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN11O75508 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN11O75508 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN11O75508 AC117500.6-201ENST00000624871 588 ntBASIC17.74■□□□□ 0.43
CLDN11O75508 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN11O75508 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN11O75508 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN11O75508 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLDN11O75508 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN11O75508 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CLDN11O75508 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN11O75508 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN11O75508 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN11O75508 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLDN11O75508 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN11O75508 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CLDN11O75508 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN11O75508 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms