Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CHMP2AO43633 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.59■□□□□ 0.73
CHMP2AO43633 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2AO43633 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2AO43633 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2AO43633 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP2AO43633 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHMP2AO43633 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.59■□□□□ 0.73
CHMP2AO43633 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.59■□□□□ 0.73
CHMP2AO43633 AC093909.1-201ENST00000504731 1122 ntBASIC19.59■□□□□ 0.73
CHMP2AO43633 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP2AO43633 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.59■□□□□ 0.73
CHMP2AO43633 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2AO43633 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP2AO43633 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP2AO43633 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CHMP2AO43633 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP2AO43633 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP2AO43633 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP2AO43633 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP2AO43633 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP2AO43633 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2AO43633 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHMP2AO43633 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP2AO43633 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP2AO43633 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP2AO43633 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2AO43633 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2AO43633 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP2AO43633 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP2AO43633 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP2AO43633 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP2AO43633 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP2AO43633 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.58■□□□□ 0.73
CHMP2AO43633 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP2AO43633 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.58■□□□□ 0.73
CHMP2AO43633 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP2AO43633 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CHMP2AO43633 RPS2P28-201ENST00000314255 741 ntBASIC19.58■□□□□ 0.72
CHMP2AO43633 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.58■□□□□ 0.72
CHMP2AO43633 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMP2AO43633 AL590627.1-203ENST00000421194 1026 ntBASIC19.58■□□□□ 0.72
CHMP2AO43633 LAGE3P1-201ENST00000425356 484 ntBASIC19.58■□□□□ 0.72
CHMP2AO43633 PRYP5-201ENST00000451909 266 ntBASIC19.58■□□□□ 0.72
CHMP2AO43633 AC092910.1-201ENST00000482027 1129 ntBASIC19.58■□□□□ 0.72
CHMP2AO43633 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.58■□□□□ 0.72
CHMP2AO43633 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CHMP2AO43633 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CHMP2AO43633 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
CHMP2AO43633 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
CHMP2AO43633 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMP2AO43633 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.58■□□□□ 0.72
CHMP2AO43633 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP2AO43633 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMP2AO43633 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP2AO43633 AP002414.3-201ENST00000589352 1468 ntBASIC19.58■□□□□ 0.72
CHMP2AO43633 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CHMP2AO43633 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
CHMP2AO43633 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CHMP2AO43633 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP2AO43633 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP2AO43633 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP2AO43633 AC005332.8-201ENST00000622750 2735 ntBASIC19.58■□□□□ 0.72
CHMP2AO43633 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP2AO43633 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP2AO43633 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2AO43633 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHMP2AO43633 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2AO43633 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2AO43633 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2AO43633 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2AO43633 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2AO43633 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2AO43633 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.57■□□□□ 0.72
CHMP2AO43633 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CHMP2AO43633 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.57■□□□□ 0.72
CHMP2AO43633 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.57■□□□□ 0.72
CHMP2AO43633 AC008735.5-201ENST00000623544 497 ntBASIC19.57■□□□□ 0.72
CHMP2AO43633 AC116407.3-201ENST00000623905 1129 ntBASIC19.57■□□□□ 0.72
CHMP2AO43633 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2AO43633 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2AO43633 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP2AO43633 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP2AO43633 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2AO43633 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP2AO43633 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2AO43633 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CHMP2AO43633 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CHMP2AO43633 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2AO43633 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHMP2AO43633 IL9RP2-201ENST00000423948 1312 ntBASIC19.56■□□□□ 0.72
CHMP2AO43633 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.56■□□□□ 0.72
CHMP2AO43633 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2AO43633 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms