Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.35■□□□□ 0.37
PHGDHO43175 DUX4L26-201ENST00000489078 1255 ntBASIC17.35■□□□□ 0.37
PHGDHO43175 GUSBP12-201ENST00000513727 720 ntBASIC17.35■□□□□ 0.37
PHGDHO43175 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.35■□□□□ 0.37
PHGDHO43175 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.35■□□□□ 0.37
PHGDHO43175 AC109462.3-201ENST00000573934 613 ntBASIC17.35■□□□□ 0.37
PHGDHO43175 AC019129.2-201ENST00000609837 1235 ntBASIC17.35■□□□□ 0.37
PHGDHO43175 AL592071.1-201ENST00000611956 408 ntBASIC17.35■□□□□ 0.37
PHGDHO43175 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PHGDHO43175 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.35■□□□□ 0.37
PHGDHO43175 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PHGDHO43175 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PHGDHO43175 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.35■□□□□ 0.37
PHGDHO43175 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PHGDHO43175 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.34■□□□□ 0.37
PHGDHO43175 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PHGDHO43175 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
PHGDHO43175 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
PHGDHO43175 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PHGDHO43175 RN7SL606P-201ENST00000472779 293 ntBASIC17.34■□□□□ 0.37
PHGDHO43175 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.34■□□□□ 0.37
PHGDHO43175 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.34■□□□□ 0.37
PHGDHO43175 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PHGDHO43175 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.34■□□□□ 0.37
PHGDHO43175 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.34■□□□□ 0.37
PHGDHO43175 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 AC124864.1-201ENST00000623408 392 ntBASIC17.34■□□□□ 0.37
PHGDHO43175 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHGDHO43175 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PHGDHO43175 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.33■□□□□ 0.37
PHGDHO43175 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.33■□□□□ 0.37
PHGDHO43175 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHGDHO43175 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHGDHO43175 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHGDHO43175 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHGDHO43175 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PHGDHO43175 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHGDHO43175 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.33■□□□□ 0.36
PHGDHO43175 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PHGDHO43175 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.33■□□□□ 0.36
PHGDHO43175 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.33■□□□□ 0.36
PHGDHO43175 AL845331.1-201ENST00000424978 1190 ntBASIC17.33■□□□□ 0.36
PHGDHO43175 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.33■□□□□ 0.36
PHGDHO43175 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.33■□□□□ 0.36
PHGDHO43175 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.33■□□□□ 0.36
PHGDHO43175 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PHGDHO43175 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.33■□□□□ 0.36
PHGDHO43175 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.33■□□□□ 0.36
PHGDHO43175 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHGDHO43175 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHGDHO43175 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms