Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.76■□□□□ 0.91
FOXN1O15353 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXN1O15353 AC022145.2-201ENST00000598203 171 ntBASIC20.76■□□□□ 0.91
FOXN1O15353 AC004817.3-201ENST00000602957 2129 ntBASIC20.76■□□□□ 0.91
FOXN1O15353 AL358472.5-202ENST00000641448 1267 ntBASIC20.76■□□□□ 0.91
FOXN1O15353 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.76■□□□□ 0.91
FOXN1O15353 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN1O15353 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN1O15353 REXO1L9P-201ENST00000604264 2108 ntBASIC20.75■□□□□ 0.91
FOXN1O15353 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN1O15353 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.75■□□□□ 0.91
FOXN1O15353 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN1O15353 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
FOXN1O15353 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
FOXN1O15353 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
FOXN1O15353 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN1O15353 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN1O15353 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.75■□□□□ 0.91
FOXN1O15353 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN1O15353 NME2P1-201ENST00000426182 414 ntBASIC20.75■□□□□ 0.91
FOXN1O15353 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN1O15353 KRT19P2-202ENST00000557173 1012 ntBASIC20.75■□□□□ 0.91
FOXN1O15353 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.75■□□□□ 0.91
FOXN1O15353 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN1O15353 BCAR1-209ENST00000546196 1340 ntBASIC20.75■□□□□ 0.91
FOXN1O15353 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.75■□□□□ 0.91
FOXN1O15353 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXN1O15353 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
FOXN1O15353 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN1O15353 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN1O15353 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN1O15353 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN1O15353 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN1O15353 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
FOXN1O15353 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN1O15353 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.74■□□□□ 0.91
FOXN1O15353 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
FOXN1O15353 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
FOXN1O15353 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN1O15353 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN1O15353 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.74■□□□□ 0.91
FOXN1O15353 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN1O15353 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.74■□□□□ 0.91
FOXN1O15353 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.74■□□□□ 0.91
FOXN1O15353 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.74■□□□□ 0.91
FOXN1O15353 CRB3P1-201ENST00000449338 276 ntBASIC20.74■□□□□ 0.91
FOXN1O15353 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXN1O15353 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN1O15353 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
FOXN1O15353 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN1O15353 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXN1O15353 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN1O15353 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN1O15353 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN1O15353 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXN1O15353 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN1O15353 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXN1O15353 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN1O15353 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN1O15353 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.73■□□□□ 0.91
FOXN1O15353 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN1O15353 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN1O15353 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
FOXN1O15353 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
FOXN1O15353 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXN1O15353 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN1O15353 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.73■□□□□ 0.91
FOXN1O15353 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
FOXN1O15353 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.73■□□□□ 0.91
FOXN1O15353 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXN1O15353 AC004790.2-201ENST00000623588 572 ntBASIC20.73■□□□□ 0.91
FOXN1O15353 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXN1O15353 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN1O15353 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN1O15353 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN1O15353 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN1O15353 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN1O15353 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN1O15353 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
FOXN1O15353 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN1O15353 AC003669.1-201ENST00000334569 611 ntBASIC20.72■□□□□ 0.91
FOXN1O15353 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN1O15353 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXN1O15353 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
FOXN1O15353 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
FOXN1O15353 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.72■□□□□ 0.91
FOXN1O15353 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN1O15353 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.72■□□□□ 0.91
FOXN1O15353 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.72■□□□□ 0.91
FOXN1O15353 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.72■□□□□ 0.91
FOXN1O15353 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.72■□□□□ 0.91
FOXN1O15353 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms