Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PIK3C2AO00443 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC23.08■■□□□ 1.28
PIK3C2AO00443 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PIK3C2AO00443 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PIK3C2AO00443 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
PIK3C2AO00443 AL355312.1-201ENST00000407115 2176 ntBASIC23.07■■□□□ 1.28
PIK3C2AO00443 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC23.07■■□□□ 1.28
PIK3C2AO00443 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC23.07■■□□□ 1.28
PIK3C2AO00443 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC23.07■■□□□ 1.28
PIK3C2AO00443 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC23.07■■□□□ 1.28
PIK3C2AO00443 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
PIK3C2AO00443 RNU1-129P-201ENST00000384064 167 ntBASIC23.07■■□□□ 1.28
PIK3C2AO00443 KLF2P3-201ENST00000451977 1087 ntBASIC23.07■■□□□ 1.28
PIK3C2AO00443 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC23.07■■□□□ 1.28
PIK3C2AO00443 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC23.07■■□□□ 1.28
PIK3C2AO00443 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC23.07■■□□□ 1.28
PIK3C2AO00443 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC23.07■■□□□ 1.28
PIK3C2AO00443 U1.21-201ENST00000580816 167 ntBASIC23.07■■□□□ 1.28
PIK3C2AO00443 AL031055.1-201ENST00000606362 631 ntBASIC23.07■■□□□ 1.28
PIK3C2AO00443 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PIK3C2AO00443 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC23.07■■□□□ 1.28
PIK3C2AO00443 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PIK3C2AO00443 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PIK3C2AO00443 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PIK3C2AO00443 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC23.07■■□□□ 1.28
PIK3C2AO00443 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC23.07■■□□□ 1.28
PIK3C2AO00443 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
PIK3C2AO00443 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PIK3C2AO00443 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PIK3C2AO00443 AC004408.2-201ENST00000623613 2777 ntBASIC23.07■■□□□ 1.28
PIK3C2AO00443 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 UGT1A2P-201ENST00000454886 866 ntBASIC23.06■■□□□ 1.28
PIK3C2AO00443 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 HFE2-206ENST00000634927 506 ntTSL 4 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PIK3C2AO00443 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PIK3C2AO00443 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PIK3C2AO00443 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PIK3C2AO00443 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PIK3C2AO00443 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PIK3C2AO00443 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PIK3C2AO00443 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PIK3C2AO00443 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 EGFEM1P-202ENST00000431685 1563 ntBASIC23.06■■□□□ 1.28
PIK3C2AO00443 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PIK3C2AO00443 RPL30-202ENST00000396070 440 ntTSL 2 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 AL671277.1-201ENST00000429656 993 ntBASIC23.06■■□□□ 1.28
PIK3C2AO00443 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PIK3C2AO00443 AC109635.5-201ENST00000533593 962 ntBASIC23.06■■□□□ 1.28
PIK3C2AO00443 AL512356.2-201ENST00000546955 174 ntBASIC23.06■■□□□ 1.28
PIK3C2AO00443 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
PIK3C2AO00443 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PIK3C2AO00443 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PIK3C2AO00443 AC012317.2-201ENST00000623305 2251 ntBASIC23.05■■□□□ 1.28
PIK3C2AO00443 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PIK3C2AO00443 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PIK3C2AO00443 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PIK3C2AO00443 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PIK3C2AO00443 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 AC005237.2-201ENST00000434368 219 ntBASIC23.05■■□□□ 1.28
PIK3C2AO00443 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PIK3C2AO00443 YTHDF3-AS1-201ENST00000603538 718 ntBASIC23.05■■□□□ 1.28
PIK3C2AO00443 RAB34-224ENST00000636513 888 ntTSL 5 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PIK3C2AO00443 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PIK3C2AO00443 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PIK3C2AO00443 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PIK3C2AO00443 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PIK3C2AO00443 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PIK3C2AO00443 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PIK3C2AO00443 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PIK3C2AO00443 GNAS-203ENST00000306120 1878 ntBASIC23.04■■□□□ 1.28
PIK3C2AO00443 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PIK3C2AO00443 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PIK3C2AO00443 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC23.04■■□□□ 1.28
PIK3C2AO00443 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
PIK3C2AO00443 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PIK3C2AO00443 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PIK3C2AO00443 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC23.04■■□□□ 1.28
PIK3C2AO00443 AC125807.1-201ENST00000483097 614 ntBASIC23.04■■□□□ 1.28
PIK3C2AO00443 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms