Protein–RNA interactions for Protein: O00231

PSMD11, 26S proteasome non-ATPase regulatory subunit 11, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11O00231 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.43■□□□□ 0.38
PSMD11O00231 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.43■□□□□ 0.38
PSMD11O00231 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PSMD11O00231 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PSMD11O00231 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.43■□□□□ 0.38
PSMD11O00231 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PSMD11O00231 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.42■□□□□ 0.38
PSMD11O00231 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PSMD11O00231 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 GNAS-203ENST00000306120 1878 ntBASIC17.42■□□□□ 0.38
PSMD11O00231 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PSMD11O00231 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.42■□□□□ 0.38
PSMD11O00231 AL031284.1-201ENST00000419297 478 ntBASIC17.42■□□□□ 0.38
PSMD11O00231 LAGE3P1-201ENST00000425356 484 ntBASIC17.42■□□□□ 0.38
PSMD11O00231 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.42■□□□□ 0.38
PSMD11O00231 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PSMD11O00231 AP001005.1-201ENST00000571755 1248 ntBASIC17.42■□□□□ 0.38
PSMD11O00231 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.42■□□□□ 0.38
PSMD11O00231 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PSMD11O00231 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PSMD11O00231 AC011270.2-201ENST00000624293 2550 ntBASIC17.42■□□□□ 0.38
PSMD11O00231 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 AC148477.5-201ENST00000625164 1645 ntBASIC17.42■□□□□ 0.38
PSMD11O00231 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PSMD11O00231 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PSMD11O00231 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.42■□□□□ 0.38
PSMD11O00231 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PSMD11O00231 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSMD11O00231 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD11O00231 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.41■□□□□ 0.38
PSMD11O00231 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD11O00231 NOC2LP2-201ENST00000407594 1944 ntBASIC17.41■□□□□ 0.38
PSMD11O00231 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
PSMD11O00231 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD11O00231 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD11O00231 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.41■□□□□ 0.38
PSMD11O00231 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
PSMD11O00231 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PSMD11O00231 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD11O00231 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.41■□□□□ 0.38
PSMD11O00231 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.41■□□□□ 0.38
PSMD11O00231 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD11O00231 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD11O00231 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD11O00231 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.41■□□□□ 0.38
PSMD11O00231 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.41■□□□□ 0.38
PSMD11O00231 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.41■□□□□ 0.38
PSMD11O00231 AC093909.1-201ENST00000504731 1122 ntBASIC17.41■□□□□ 0.38
PSMD11O00231 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.41■□□□□ 0.38
PSMD11O00231 RNA5SP419-201ENST00000515908 135 ntBASIC17.41■□□□□ 0.38
PSMD11O00231 OR7E14P-202ENST00000530490 1290 ntBASIC17.41■□□□□ 0.38
PSMD11O00231 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.41■□□□□ 0.38
PSMD11O00231 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.41■□□□□ 0.38
PSMD11O00231 AL589182.2-201ENST00000619332 1049 ntBASIC17.41■□□□□ 0.38
PSMD11O00231 AC107918.4-202ENST00000641623 219 ntBASIC17.41■□□□□ 0.38
PSMD11O00231 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD11O00231 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD11O00231 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD11O00231 HLA-A-201ENST00000376802 1334 ntBASIC17.41■□□□□ 0.38
PSMD11O00231 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PSMD11O00231 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.41■□□□□ 0.38
PSMD11O00231 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD11O00231 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
PSMD11O00231 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD11O00231 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.4■□□□□ 0.38
PSMD11O00231 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.4■□□□□ 0.38
PSMD11O00231 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.4■□□□□ 0.38
PSMD11O00231 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.4■□□□□ 0.38
PSMD11O00231 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.4■□□□□ 0.38
PSMD11O00231 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PSMD11O00231 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.4■□□□□ 0.38
PSMD11O00231 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD11O00231 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PSMD11O00231 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PSMD11O00231 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.4■□□□□ 0.38
PSMD11O00231 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.4■□□□□ 0.38
PSMD11O00231 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PSMD11O00231 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.4■□□□□ 0.38
PSMD11O00231 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.4■□□□□ 0.38
PSMD11O00231 AC148477.8-201ENST00000624298 468 ntBASIC17.4■□□□□ 0.38
PSMD11O00231 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD11O00231 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.4■□□□□ 0.38
PSMD11O00231 AL355312.1-201ENST00000407115 2176 ntBASIC17.4■□□□□ 0.38
PSMD11O00231 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
PSMD11O00231 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD11O00231 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PSMD11O00231 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.4■□□□□ 0.38
PSMD11O00231 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD11O00231 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms