Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 AC093010.1-201ENST00000473625 1624 ntBASIC12.32□□□□□ -0.44
TMEM238C9JI98 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 AC009090.5-201ENST00000624886 2285 ntBASIC12.31□□□□□ -0.44
TMEM238C9JI98 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 AC004911.1-201ENST00000416316 871 ntBASIC12.31□□□□□ -0.44
TMEM238C9JI98 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 KRT8P32-201ENST00000512863 1461 ntBASIC12.31□□□□□ -0.44
TMEM238C9JI98 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM238C9JI98 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TMEM238C9JI98 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 MAX-217ENST00000557277 728 ntTSL 3 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 MIR5787-201ENST00000611784 55 ntBASIC12.3□□□□□ -0.44
TMEM238C9JI98 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 AC007191.1-201ENST00000623179 2995 ntBASIC12.3□□□□□ -0.44
TMEM238C9JI98 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TMEM238C9JI98 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM238C9JI98 AC139749.1-202ENST00000617529 3139 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms