Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00473A8K010 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00473A8K010 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00473A8K010 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00473A8K010 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC00473A8K010 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00473A8K010 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00473A8K010 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00473A8K010 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINC00473A8K010 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00473A8K010 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00473A8K010 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00473A8K010 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00473A8K010 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00473A8K010 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 AL049757.1-201ENST00000616842 1596 ntBASIC14.18□□□□□ -0.14
LINC00473A8K010 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINC00473A8K010 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LINC00473A8K010 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00473A8K010 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LINC00473A8K010 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00473A8K010 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LINC00473A8K010 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LINC00473A8K010 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00473A8K010 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC00473A8K010 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00473A8K010 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00473A8K010 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 AC122714.2-201ENST00000502787 707 ntBASIC14.18□□□□□ -0.14
LINC00473A8K010 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
LINC00473A8K010 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.18□□□□□ -0.14
LINC00473A8K010 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00473A8K010 LINC01238-205ENST00000567549 1107 ntBASIC14.18□□□□□ -0.14
LINC00473A8K010 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00473A8K010 AC011498.5-201ENST00000592027 486 ntBASIC14.18□□□□□ -0.14
LINC00473A8K010 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00473A8K010 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00473A8K010 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LINC00473A8K010 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00473A8K010 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00473A8K010 FLJ38576-201ENST00000623820 2459 ntBASIC14.18□□□□□ -0.14
LINC00473A8K010 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LINC00473A8K010 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00473A8K010 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00473A8K010 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LINC00473A8K010 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00473A8K010 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00473A8K010 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00473A8K010 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00473A8K010 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
LINC00473A8K010 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00473A8K010 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00473A8K010 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC00473A8K010 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00473A8K010 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LINC00473A8K010 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00473A8K010 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
LINC00473A8K010 IGHV3-41-201ENST00000613121 348 ntBASIC14.17□□□□□ -0.14
LINC00473A8K010 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINC00473A8K010 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00473A8K010 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms