Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 REXO1L11P-201ENST00000620964 1927 ntBASIC17.71■□□□□ 0.43
CAPN8A6NHC0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 AC005104.2-201ENST00000427818 678 ntBASIC17.71■□□□□ 0.43
CAPN8A6NHC0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 AL031008.1-201ENST00000619963 541 ntBASIC17.71■□□□□ 0.43
CAPN8A6NHC0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN8A6NHC0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CAPN8A6NHC0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CAPN8A6NHC0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 AC103564.2-201ENST00000432853 1299 ntBASIC17.7■□□□□ 0.42
CAPN8A6NHC0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 AC104692.2-201ENST00000603054 253 ntBASIC17.7■□□□□ 0.42
CAPN8A6NHC0 BX640515.1-201ENST00000617215 977 ntBASIC17.7■□□□□ 0.42
CAPN8A6NHC0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN8A6NHC0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 AD000864.1-201ENST00000624076 2295 ntBASIC17.69■□□□□ 0.42
CAPN8A6NHC0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 AC092183.1-201ENST00000469884 875 ntBASIC17.69■□□□□ 0.42
CAPN8A6NHC0 AC002558.1-201ENST00000488906 803 ntBASIC17.69■□□□□ 0.42
CAPN8A6NHC0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 AC019129.2-201ENST00000609837 1235 ntBASIC17.69■□□□□ 0.42
CAPN8A6NHC0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 LINC00304-203ENST00000565008 1864 ntBASIC17.69■□□□□ 0.42
CAPN8A6NHC0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN8A6NHC0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN8A6NHC0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms