Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 AC005104.2-201ENST00000427818 678 ntBASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 AL138831.2-201ENST00000606564 490 ntBASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 AC125634.1-201ENST00000438758 1403 ntBASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
PRAMEF25A6NGN4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEF25A6NGN4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEF25A6NGN4 UBALD1-205ENST00000590891 2641 ntBASIC16.33■□□□□ 0.21
PRAMEF25A6NGN4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEF25A6NGN4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.33■□□□□ 0.21
PRAMEF25A6NGN4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.33■□□□□ 0.21
PRAMEF25A6NGN4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEF25A6NGN4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEF25A6NGN4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
PRAMEF25A6NGN4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 AC096582.2-201ENST00000510860 516 ntBASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 AC138894.3-201ENST00000603787 634 ntBASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PRAMEF25A6NGN4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 NUS1P1-201ENST00000446295 882 ntBASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 AC012313.10-201ENST00000623509 926 ntBASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF25A6NGN4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF25A6NGN4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms