Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 HLA-A-202ENST00000376806 1854 ntBASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 KRT18P6-201ENST00000555540 1265 ntBASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV3S1A0A5B6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 AL157888.1-201ENST00000631930 593 ntBASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 AC116562.4-202ENST00000641738 218 ntBASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV3S1A0A5B6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.29■□□□□ 0.2
TCRBV3S1A0A5B6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms