Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC006449.5-201ENST00000610658 2098 ntBASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 FAM220CP-201ENST00000395253 831 ntBASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC009336.1-201ENST00000608941 1553 ntBASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-3A0A0A0MS03 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 AK4P3-201ENST00000418260 669 ntBASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 KRT18P57-201ENST00000443599 1254 ntBASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV5-3A0A0A0MS03 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms