Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AP002472.1-201ENST00000577490 586 ntBASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3BQ9UBC3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 CXCL1P1-201ENST00000502804 216 ntBASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.11■□□□□ 0.49
DNMT3BQ9UBC3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 AL645939.2-201ENST00000427340 991 ntBASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 AC027612.4-201ENST00000605371 583 ntBASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.1■□□□□ 0.49
DNMT3BQ9UBC3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 AC091812.2-201ENST00000619081 385 ntBASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNMT3BQ9UBC3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms