Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 AP002414.1-201ENST00000391405 1147 ntBASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 MRPL20P1-201ENST00000400819 433 ntBASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 HCG4B-203ENST00000450128 991 ntBASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 AC018845.2-201ENST00000568326 409 ntBASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 GGTLC5P-201ENST00000617623 998 ntBASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 AC002310.6-201ENST00000624451 1377 ntBASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.83■□□□□ 0.28
LRIT1Q9P2V4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 MCCD1P2-201ENST00000423228 335 ntBASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 AC004967.1-201ENST00000453589 447 ntBASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 AC010654.1-201ENST00000615722 808 ntBASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.82■□□□□ 0.28
LRIT1Q9P2V4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 AC018470.1-201ENST00000624790 3129 ntBASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 AC134684.3-201ENST00000641758 218 ntBASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 AC092865.6-201ENST00000642101 219 ntBASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LRIT1Q9P2V4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms