Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 AC109462.3-201ENST00000573934 613 ntBASIC15.28■□□□□ 0.04
CDH20Q9HBT6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 SIRPAP1-201ENST00000448467 1770 ntBASIC15.28■□□□□ 0.04
CDH20Q9HBT6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 MYCLP1-201ENST00000372451 1075 ntBASIC15.27■□□□□ 0.04
CDH20Q9HBT6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 TSPY19P-201ENST00000418461 509 ntBASIC15.27■□□□□ 0.04
CDH20Q9HBT6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 TSPY18P-201ENST00000441642 509 ntBASIC15.27■□□□□ 0.04
CDH20Q9HBT6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 AC002558.1-201ENST00000488906 803 ntBASIC15.27■□□□□ 0.04
CDH20Q9HBT6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 AL732292.2-201ENST00000609649 430 ntBASIC15.27■□□□□ 0.04
CDH20Q9HBT6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH20Q9HBT6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CDH20Q9HBT6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH20Q9HBT6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH20Q9HBT6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CDH20Q9HBT6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.27■□□□□ 0.03
CDH20Q9HBT6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CDH20Q9HBT6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH20Q9HBT6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH20Q9HBT6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH20Q9HBT6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH20Q9HBT6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH20Q9HBT6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 HLA-J-201ENST00000462773 1622 ntBASIC15.25■□□□□ 0.03
CDH20Q9HBT6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms