Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC010327.4-202ENST00000591484 748 ntBASIC18.78■□□□□ 0.6
NXF3Q9H4D5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 AC133963.1-201ENST00000504166 1679 ntBASIC18.77■□□□□ 0.6
NXF3Q9H4D5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 PRSS29P-201ENST00000440800 595 ntBASIC18.77■□□□□ 0.6
NXF3Q9H4D5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 OR7E47P-204ENST00000575924 449 ntBASIC18.77■□□□□ 0.6
NXF3Q9H4D5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NXF3Q9H4D5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NXF3Q9H4D5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NXF3Q9H4D5 PI4KAP1-204ENST00000612579 1703 ntBASIC18.77■□□□□ 0.59
NXF3Q9H4D5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NXF3Q9H4D5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.77■□□□□ 0.59
NXF3Q9H4D5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NXF3Q9H4D5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 MRPL20P1-201ENST00000400819 433 ntBASIC18.76■□□□□ 0.59
NXF3Q9H4D5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 AC002347.1-201ENST00000569543 541 ntBASIC18.76■□□□□ 0.59
NXF3Q9H4D5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 AC010654.1-201ENST00000615722 808 ntBASIC18.76■□□□□ 0.59
NXF3Q9H4D5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NXF3Q9H4D5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 UPF3AP3-201ENST00000420996 769 ntBASIC18.75■□□□□ 0.59
NXF3Q9H4D5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 AC004832.2-201ENST00000426397 482 ntBASIC18.75■□□□□ 0.59
NXF3Q9H4D5 GPX1P2-201ENST00000429271 606 ntBASIC18.75■□□□□ 0.59
NXF3Q9H4D5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.75■□□□□ 0.59
NXF3Q9H4D5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms