Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS11Q9H270 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VPS11Q9H270 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
VPS11Q9H270 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
VPS11Q9H270 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS11Q9H270 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS11Q9H270 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
VPS11Q9H270 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 LIN28AP1-201ENST00000429574 405 ntBASIC17.56■□□□□ 0.4
VPS11Q9H270 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.56■□□□□ 0.4
VPS11Q9H270 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS11Q9H270 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS11Q9H270 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VPS11Q9H270 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VPS11Q9H270 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VPS11Q9H270 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS11Q9H270 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS11Q9H270 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
VPS11Q9H270 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS11Q9H270 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS11Q9H270 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS11Q9H270 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VPS11Q9H270 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VPS11Q9H270 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.55■□□□□ 0.4
VPS11Q9H270 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS11Q9H270 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.55■□□□□ 0.4
VPS11Q9H270 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS11Q9H270 SLC25A3P1-201ENST00000443844 931 ntBASIC17.55■□□□□ 0.4
VPS11Q9H270 ATP5G1P1-201ENST00000448724 379 ntBASIC17.55■□□□□ 0.4
VPS11Q9H270 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.55■□□□□ 0.4
VPS11Q9H270 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.55■□□□□ 0.4
VPS11Q9H270 AL441883.1-201ENST00000566170 1045 ntBASIC17.55■□□□□ 0.4
VPS11Q9H270 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.55■□□□□ 0.4
VPS11Q9H270 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VPS11Q9H270 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VPS11Q9H270 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VPS11Q9H270 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VPS11Q9H270 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS11Q9H270 AL603756.1-201ENST00000606511 2163 ntBASIC17.55■□□□□ 0.4
VPS11Q9H270 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.54■□□□□ 0.4
VPS11Q9H270 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
VPS11Q9H270 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
VPS11Q9H270 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
VPS11Q9H270 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.54■□□□□ 0.4
VPS11Q9H270 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.54■□□□□ 0.4
VPS11Q9H270 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
VPS11Q9H270 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
VPS11Q9H270 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms