Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 NBPF21P-201ENST00000425093 1451 ntBASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 LINC00304-203ENST00000565008 1864 ntBASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AC099343.3-201ENST00000605834 2503 ntBASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AC016396.2-201ENST00000562575 1417 ntBASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
LCE3DQ9BYE3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
LCE3DQ9BYE3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
LCE3DQ9BYE3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
LCE3DQ9BYE3 DKFZP434A062-201ENST00000573103 5021 ntBASIC4.71□□□□□ -1.65
LCE3DQ9BYE3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
LCE3DQ9BYE3 PCDHB17P-201ENST00000539533 2393 ntBASIC4.71□□□□□ -1.65
LCE3DQ9BYE3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
LCE3DQ9BYE3 MST1L-201ENST00000442552 2185 ntBASIC4.71□□□□□ -1.65
LCE3DQ9BYE3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
LCE3DQ9BYE3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.65
LCE3DQ9BYE3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
LCE3DQ9BYE3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms