Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBA1CQ9BQE3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.52■□□□□ 0.23
TUBA1CQ9BQE3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBA1CQ9BQE3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 AP000593.1-201ENST00000393668 712 ntBASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 KRT18P56-201ENST00000507275 550 ntBASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 AC009065.1-201ENST00000564055 1225 ntBASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBA1CQ9BQE3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 HCG4P8-203ENST00000443049 980 ntBASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBA1CQ9BQE3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 BX276092.5-203ENST00000456199 560 ntBASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 RNF126P1-202ENST00000569893 925 ntBASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 AL121672.3-201ENST00000608644 468 ntBASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 AL163051.1-201ENST00000569214 1512 ntBASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBA1CQ9BQE3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms