Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CGREF1Q99674 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.61■□□□□ 0.25
CGREF1Q99674 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CGREF1Q99674 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.6■□□□□ 0.25
CGREF1Q99674 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CGREF1Q99674 AC002558.1-201ENST00000488906 803 ntBASIC16.6■□□□□ 0.25
CGREF1Q99674 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.6■□□□□ 0.25
CGREF1Q99674 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CGREF1Q99674 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.6■□□□□ 0.25
CGREF1Q99674 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.6■□□□□ 0.25
CGREF1Q99674 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.6■□□□□ 0.25
CGREF1Q99674 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.6■□□□□ 0.25
CGREF1Q99674 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.6■□□□□ 0.25
CGREF1Q99674 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGREF1Q99674 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CGREF1Q99674 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CGREF1Q99674 AC093525.9-201ENST00000624961 1746 ntBASIC16.59■□□□□ 0.25
CGREF1Q99674 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.59■□□□□ 0.25
CGREF1Q99674 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.59■□□□□ 0.25
CGREF1Q99674 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.59■□□□□ 0.25
CGREF1Q99674 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CGREF1Q99674 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.59■□□□□ 0.25
CGREF1Q99674 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
CGREF1Q99674 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.59■□□□□ 0.25
CGREF1Q99674 AC096633.1-201ENST00000422446 749 ntBASIC16.59■□□□□ 0.25
CGREF1Q99674 HLA-F-220ENST00000434407 884 ntBASIC16.59■□□□□ 0.25
CGREF1Q99674 MIR4497-201ENST00000583208 89 ntBASIC16.59■□□□□ 0.25
CGREF1Q99674 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.59■□□□□ 0.25
CGREF1Q99674 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.59■□□□□ 0.25
CGREF1Q99674 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 AL138966.2-201ENST00000621997 464 ntBASIC16.59■□□□□ 0.25
CGREF1Q99674 AL023973.1-201ENST00000624619 620 ntBASIC16.59■□□□□ 0.25
CGREF1Q99674 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CGREF1Q99674 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.59■□□□□ 0.25
CGREF1Q99674 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CGREF1Q99674 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.59■□□□□ 0.25
CGREF1Q99674 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.59■□□□□ 0.25
CGREF1Q99674 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.59■□□□□ 0.25
CGREF1Q99674 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.59■□□□□ 0.25
CGREF1Q99674 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGREF1Q99674 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CGREF1Q99674 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CGREF1Q99674 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CGREF1Q99674 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.58■□□□□ 0.25
CGREF1Q99674 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.58■□□□□ 0.25
CGREF1Q99674 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.58■□□□□ 0.25
CGREF1Q99674 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CGREF1Q99674 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CGREF1Q99674 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CGREF1Q99674 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CGREF1Q99674 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CGREF1Q99674 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CGREF1Q99674 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms