Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.76□□□□□ -0.37
MUC4Q99102 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.76□□□□□ -0.37
MUC4Q99102 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.76□□□□□ -0.37
MUC4Q99102 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.76□□□□□ -0.37
MUC4Q99102 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.76□□□□□ -0.37
MUC4Q99102 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.76□□□□□ -0.37
MUC4Q99102 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.76□□□□□ -0.37
MUC4Q99102 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.76□□□□□ -0.37
MUC4Q99102 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
MUC4Q99102 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.76□□□□□ -0.37
MUC4Q99102 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.76□□□□□ -0.37
MUC4Q99102 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.76□□□□□ -0.37
MUC4Q99102 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 AC090340.1-201ENST00000620778 4980 ntBASIC12.76□□□□□ -0.37
MUC4Q99102 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 AC116353.5-201ENST00000638148 1699 ntBASIC12.76□□□□□ -0.37
MUC4Q99102 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
MUC4Q99102 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.76□□□□□ -0.37
MUC4Q99102 ZNF444P1-201ENST00000559497 298 ntBASIC12.76□□□□□ -0.37
MUC4Q99102 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.76□□□□□ -0.37
MUC4Q99102 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.76□□□□□ -0.37
MUC4Q99102 AC009154.2-201ENST00000621177 724 ntBASIC12.76□□□□□ -0.37
MUC4Q99102 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.76□□□□□ -0.37
MUC4Q99102 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.75□□□□□ -0.37
MUC4Q99102 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.75□□□□□ -0.37
MUC4Q99102 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
MUC4Q99102 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
MUC4Q99102 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.75□□□□□ -0.37
MUC4Q99102 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.75□□□□□ -0.37
MUC4Q99102 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.75□□□□□ -0.37
MUC4Q99102 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
MUC4Q99102 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
MUC4Q99102 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.75□□□□□ -0.37
MUC4Q99102 AC016396.2-201ENST00000562575 1417 ntBASIC12.75□□□□□ -0.37
MUC4Q99102 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.75□□□□□ -0.37
MUC4Q99102 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.75□□□□□ -0.37
MUC4Q99102 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.75□□□□□ -0.37
MUC4Q99102 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.75□□□□□ -0.37
MUC4Q99102 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
MUC4Q99102 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
MUC4Q99102 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
MUC4Q99102 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 FLJ38576-201ENST00000623820 2459 ntBASIC12.75□□□□□ -0.37
MUC4Q99102 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.75□□□□□ -0.37
MUC4Q99102 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
MUC4Q99102 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MUC4Q99102 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
MUC4Q99102 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MUC4Q99102 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MUC4Q99102 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.74□□□□□ -0.37
MUC4Q99102 AL022342.1-201ENST00000400363 863 ntBASIC12.74□□□□□ -0.37
MUC4Q99102 AL645929.1-201ENST00000420084 975 ntBASIC12.74□□□□□ -0.37
MUC4Q99102 TSPY12P-201ENST00000421279 868 ntBASIC12.74□□□□□ -0.37
MUC4Q99102 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MUC4Q99102 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.74□□□□□ -0.37
MUC4Q99102 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.74□□□□□ -0.37
MUC4Q99102 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.74□□□□□ -0.37
MUC4Q99102 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.74□□□□□ -0.37
MUC4Q99102 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
MUC4Q99102 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MUC4Q99102 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MUC4Q99102 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MUC4Q99102 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MUC4Q99102 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MUC4Q99102 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.74□□□□□ -0.37
MUC4Q99102 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms