Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.57■□□□□ 0.08
SPENQ96T58 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPENQ96T58 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPENQ96T58 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPENQ96T58 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPENQ96T58 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPENQ96T58 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPENQ96T58 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPENQ96T58 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPENQ96T58 CNN2P2-201ENST00000443536 909 ntBASIC15.57■□□□□ 0.08
SPENQ96T58 CNN2P3-201ENST00000450201 906 ntBASIC15.57■□□□□ 0.08
SPENQ96T58 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SPENQ96T58 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.57■□□□□ 0.08
SPENQ96T58 AC025678.2-201ENST00000562061 970 ntBASIC15.57■□□□□ 0.08
SPENQ96T58 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.57■□□□□ 0.08
SPENQ96T58 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.57■□□□□ 0.08
SPENQ96T58 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.57■□□□□ 0.08
SPENQ96T58 AL136317.3-201ENST00000618497 906 ntBASIC15.57■□□□□ 0.08
SPENQ96T58 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SPENQ96T58 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SPENQ96T58 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPENQ96T58 AL590787.1-201ENST00000568856 1315 ntBASIC15.57■□□□□ 0.08
SPENQ96T58 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.57■□□□□ 0.08
SPENQ96T58 AC109462.3-201ENST00000573934 613 ntBASIC15.57■□□□□ 0.08
SPENQ96T58 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPENQ96T58 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.56■□□□□ 0.08
SPENQ96T58 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPENQ96T58 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
SPENQ96T58 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.56■□□□□ 0.08
SPENQ96T58 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.56■□□□□ 0.08
SPENQ96T58 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.56■□□□□ 0.08
SPENQ96T58 AC092580.3-201ENST00000430932 139 ntBASIC15.56■□□□□ 0.08
SPENQ96T58 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.56■□□□□ 0.08
SPENQ96T58 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SPENQ96T58 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.56■□□□□ 0.08
SPENQ96T58 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.56■□□□□ 0.08
SPENQ96T58 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPENQ96T58 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPENQ96T58 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPENQ96T58 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SPENQ96T58 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPENQ96T58 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPENQ96T58 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPENQ96T58 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.56■□□□□ 0.08
SPENQ96T58 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.56■□□□□ 0.08
SPENQ96T58 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.56■□□□□ 0.08
SPENQ96T58 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.56■□□□□ 0.08
SPENQ96T58 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPENQ96T58 AC004408.2-201ENST00000623613 2777 ntBASIC15.56■□□□□ 0.08
SPENQ96T58 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
SPENQ96T58 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPENQ96T58 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPENQ96T58 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPENQ96T58 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPENQ96T58 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.56■□□□□ 0.08
SPENQ96T58 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPENQ96T58 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SPENQ96T58 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.56■□□□□ 0.08
SPENQ96T58 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.56■□□□□ 0.08
SPENQ96T58 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.55■□□□□ 0.08
SPENQ96T58 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.55■□□□□ 0.08
SPENQ96T58 AC140658.5-201ENST00000438532 169 ntBASIC15.55■□□□□ 0.08
SPENQ96T58 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.55■□□□□ 0.08
SPENQ96T58 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.55■□□□□ 0.08
SPENQ96T58 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.55■□□□□ 0.08
SPENQ96T58 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.55■□□□□ 0.08
SPENQ96T58 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.55■□□□□ 0.08
SPENQ96T58 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.55■□□□□ 0.08
SPENQ96T58 SPDYE22P-201ENST00000582158 798 ntBASIC15.55■□□□□ 0.08
SPENQ96T58 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.55■□□□□ 0.08
SPENQ96T58 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SPENQ96T58 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.55■□□□□ 0.08
SPENQ96T58 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 AL135999.2-201ENST00000622438 1686 ntBASIC15.55■□□□□ 0.08
SPENQ96T58 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.55■□□□□ 0.08
SPENQ96T58 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SPENQ96T58 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.55■□□□□ 0.08
SPENQ96T58 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SPENQ96T58 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 NME2P1-201ENST00000426182 414 ntBASIC15.55■□□□□ 0.08
SPENQ96T58 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.55■□□□□ 0.08
SPENQ96T58 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.55■□□□□ 0.08
SPENQ96T58 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SPENQ96T58 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SPENQ96T58 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.55■□□□□ 0.08
SPENQ96T58 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 LINC01225-203ENST00000563550 1244 ntBASIC15.55■□□□□ 0.08
SPENQ96T58 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.55■□□□□ 0.08
SPENQ96T58 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPENQ96T58 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms