Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 Z83851.2-201ENST00000609564 659 ntBASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 AF228730.7-201ENST00000641842 219 ntBASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 AL135999.2-201ENST00000622438 1686 ntBASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 ELK2BP-201ENST00000415014 1224 ntBASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 RNA5SP415-201ENST00000517246 115 ntBASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 AL805961.1-202ENST00000641562 540 ntBASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 LYSMD4-203ENST00000378904 2122 ntBASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDK5RAP1Q96SZ6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 AC006504.4-201ENST00000592118 1568 ntBASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 KRT18P58-201ENST00000527480 1120 ntBASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 SLC25A1P1-201ENST00000528351 927 ntBASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 AC104109.2-201ENST00000602919 1418 ntBASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK5RAP1Q96SZ6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 AP002414.1-201ENST00000391405 1147 ntBASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 AP000347.1-202ENST00000435868 847 ntBASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 AL591424.1-201ENST00000442569 1213 ntBASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 UNC93B6-202ENST00000528242 690 ntBASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms