Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 MIR4469-201ENST00000583919 79 ntBASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 AC022145.2-201ENST00000598203 171 ntBASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 AL135744.1-201ENST00000565098 629 ntBASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CDK5RAP2Q96SN8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP2Q96SN8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 SLC22A20-204ENST00000530038 1673 ntBASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK5RAP2Q96SN8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms