Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK1Q96PY6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.63■□□□□ 0.89
NEK1Q96PY6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK1Q96PY6 KLF4P1-201ENST00000412782 1185 ntBASIC20.63■□□□□ 0.89
NEK1Q96PY6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.63■□□□□ 0.89
NEK1Q96PY6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.63■□□□□ 0.89
NEK1Q96PY6 KRT16P4-201ENST00000453883 522 ntBASIC20.63■□□□□ 0.89
NEK1Q96PY6 FOSL1P1-201ENST00000511041 816 ntBASIC20.63■□□□□ 0.89
NEK1Q96PY6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK1Q96PY6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.63■□□□□ 0.89
NEK1Q96PY6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.63■□□□□ 0.89
NEK1Q96PY6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.63■□□□□ 0.89
NEK1Q96PY6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.63■□□□□ 0.89
NEK1Q96PY6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.63■□□□□ 0.89
NEK1Q96PY6 AL591684.3-201ENST00000605187 298 ntBASIC20.63■□□□□ 0.89
NEK1Q96PY6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NEK1Q96PY6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK1Q96PY6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.63■□□□□ 0.89
NEK1Q96PY6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.63■□□□□ 0.89
NEK1Q96PY6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK1Q96PY6 AC093525.9-201ENST00000624961 1746 ntBASIC20.63■□□□□ 0.89
NEK1Q96PY6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK1Q96PY6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK1Q96PY6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.63■□□□□ 0.89
NEK1Q96PY6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK1Q96PY6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK1Q96PY6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.62■□□□□ 0.89
NEK1Q96PY6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NEK1Q96PY6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
NEK1Q96PY6 AL135999.2-201ENST00000622438 1686 ntBASIC20.62■□□□□ 0.89
NEK1Q96PY6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.62■□□□□ 0.89
NEK1Q96PY6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.62■□□□□ 0.89
NEK1Q96PY6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.62■□□□□ 0.89
NEK1Q96PY6 NUS1P1-201ENST00000446295 882 ntBASIC20.62■□□□□ 0.89
NEK1Q96PY6 MIR3652-201ENST00000579335 131 ntBASIC20.62■□□□□ 0.89
NEK1Q96PY6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
NEK1Q96PY6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.62■□□□□ 0.89
NEK1Q96PY6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.62■□□□□ 0.89
NEK1Q96PY6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NEK1Q96PY6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NEK1Q96PY6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NEK1Q96PY6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NEK1Q96PY6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NEK1Q96PY6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NEK1Q96PY6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 ABCD1P5-201ENST00000445663 754 ntBASIC20.61■□□□□ 0.89
NEK1Q96PY6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.61■□□□□ 0.89
NEK1Q96PY6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 OR6D1P-202ENST00000641007 5290 ntBASIC20.61■□□□□ 0.89
NEK1Q96PY6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NEK1Q96PY6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEK1Q96PY6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms