Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 LINC00554-201ENST00000564841 3011 ntBASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 AC016396.2-201ENST00000562575 1417 ntBASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 AC092364.2-201ENST00000596710 2692 ntBASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 MTCL1P1-201ENST00000446207 792 ntBASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 AL603756.1-201ENST00000606511 2163 ntBASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHAMP1Q96JM3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 IGHGP-201ENST00000390555 1178 ntBASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 KRT18P48-201ENST00000434763 852 ntBASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 AC093525.9-201ENST00000624961 1746 ntBASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHAMP1Q96JM3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms