Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.67■□□□□ 0.42
CHFRQ96EP1 AC090164.3-201ENST00000610780 2143 ntBASIC17.67■□□□□ 0.42
CHFRQ96EP1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHFRQ96EP1 AL513210.1-201ENST00000629608 234 ntBASIC17.67■□□□□ 0.42
CHFRQ96EP1 AC007064.4-201ENST00000637740 555 ntBASIC17.67■□□□□ 0.42
CHFRQ96EP1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHFRQ96EP1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHFRQ96EP1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CHFRQ96EP1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHFRQ96EP1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CHFRQ96EP1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHFRQ96EP1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHFRQ96EP1 AC009113.1-201ENST00000570267 2443 ntBASIC17.67■□□□□ 0.42
CHFRQ96EP1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHFRQ96EP1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHFRQ96EP1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHFRQ96EP1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHFRQ96EP1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHFRQ96EP1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHFRQ96EP1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHFRQ96EP1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 FAM185BP-201ENST00000443595 716 ntBASIC17.66■□□□□ 0.42
CHFRQ96EP1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 AP000344.2-201ENST00000512987 629 ntBASIC17.66■□□□□ 0.42
CHFRQ96EP1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 AC093028.1-201ENST00000622998 982 ntBASIC17.66■□□□□ 0.42
CHFRQ96EP1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHFRQ96EP1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHFRQ96EP1 FLJ13224-201ENST00000313737 1514 ntBASIC17.66■□□□□ 0.42
CHFRQ96EP1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHFRQ96EP1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHFRQ96EP1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.66■□□□□ 0.42
CHFRQ96EP1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHFRQ96EP1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHFRQ96EP1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHFRQ96EP1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHFRQ96EP1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHFRQ96EP1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 AC004461.1-201ENST00000412461 403 ntBASIC17.65■□□□□ 0.42
CHFRQ96EP1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 ADH5P3-201ENST00000433842 1137 ntBASIC17.65■□□□□ 0.42
CHFRQ96EP1 ACTG1P14-201ENST00000446382 1122 ntBASIC17.65■□□□□ 0.42
CHFRQ96EP1 SLC25A6P2-201ENST00000497974 877 ntBASIC17.65■□□□□ 0.42
CHFRQ96EP1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHFRQ96EP1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHFRQ96EP1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 AC106028.4-201ENST00000614509 607 ntBASIC17.65■□□□□ 0.42
CHFRQ96EP1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHFRQ96EP1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHFRQ96EP1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHFRQ96EP1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.65■□□□□ 0.42
CHFRQ96EP1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.65■□□□□ 0.42
CHFRQ96EP1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.64■□□□□ 0.42
CHFRQ96EP1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.64■□□□□ 0.42
CHFRQ96EP1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.64■□□□□ 0.41
CHFRQ96EP1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CHFRQ96EP1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.64■□□□□ 0.41
CHFRQ96EP1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHFRQ96EP1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHFRQ96EP1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHFRQ96EP1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHFRQ96EP1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHFRQ96EP1 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.64■□□□□ 0.41
CHFRQ96EP1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CHFRQ96EP1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.64■□□□□ 0.41
CHFRQ96EP1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.64■□□□□ 0.41
CHFRQ96EP1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.64■□□□□ 0.41
CHFRQ96EP1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.64■□□□□ 0.41
CHFRQ96EP1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.64■□□□□ 0.41
CHFRQ96EP1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.64■□□□□ 0.41
CHFRQ96EP1 AC105339.1-204ENST00000636249 355 ntBASIC17.64■□□□□ 0.41
CHFRQ96EP1 AC006116.8-202ENST00000587620 1550 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms