Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 SPDYE21P-201ENST00000413323 827 ntBASIC15.68■□□□□ 0.1
CPNE4Q96A23 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 AL031008.1-201ENST00000619963 541 ntBASIC15.68■□□□□ 0.1
CPNE4Q96A23 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 AC134043.2-201ENST00000624206 2238 ntBASIC15.68■□□□□ 0.1
CPNE4Q96A23 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 AC132938.5-201ENST00000624980 1813 ntBASIC15.68■□□□□ 0.1
CPNE4Q96A23 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE4Q96A23 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.68■□□□□ 0.1
CPNE4Q96A23 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 AC079781.3-201ENST00000449110 356 ntBASIC15.67■□□□□ 0.1
CPNE4Q96A23 AC073648.2-201ENST00000510116 352 ntBASIC15.67■□□□□ 0.1
CPNE4Q96A23 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 AL160237.2-201ENST00000556165 472 ntBASIC15.67■□□□□ 0.1
CPNE4Q96A23 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 AL355312.1-201ENST00000407115 2176 ntBASIC15.67■□□□□ 0.1
CPNE4Q96A23 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE4Q96A23 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.67■□□□□ 0.1
CPNE4Q96A23 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 SIGLEC30P-201ENST00000455569 941 ntBASIC15.66■□□□□ 0.1
CPNE4Q96A23 AF186996.4-201ENST00000467186 377 ntBASIC15.66■□□□□ 0.1
CPNE4Q96A23 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 AL121894.2-201ENST00000602977 491 ntBASIC15.66■□□□□ 0.1
CPNE4Q96A23 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms