Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
BRF1Q92994 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
BRF1Q92994 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.53■□□□□ 0.88
BRF1Q92994 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRF1Q92994 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRF1Q92994 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRF1Q92994 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BRF1Q92994 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BRF1Q92994 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRF1Q92994 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
BRF1Q92994 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
BRF1Q92994 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
BRF1Q92994 SLC25A1P3-201ENST00000395415 828 ntBASIC20.52■□□□□ 0.88
BRF1Q92994 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.52■□□□□ 0.88
BRF1Q92994 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BRF1Q92994 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
BRF1Q92994 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.52■□□□□ 0.88
BRF1Q92994 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.52■□□□□ 0.88
BRF1Q92994 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.52■□□□□ 0.88
BRF1Q92994 AC073592.5-201ENST00000624854 528 ntBASIC20.52■□□□□ 0.88
BRF1Q92994 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.52■□□□□ 0.88
BRF1Q92994 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRF1Q92994 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BRF1Q92994 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BRF1Q92994 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRF1Q92994 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
BRF1Q92994 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.52■□□□□ 0.87
BRF1Q92994 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.52■□□□□ 0.87
BRF1Q92994 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.52■□□□□ 0.87
BRF1Q92994 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
BRF1Q92994 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
BRF1Q92994 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.51■□□□□ 0.87
BRF1Q92994 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.51■□□□□ 0.87
BRF1Q92994 HCG4P8-203ENST00000443049 980 ntBASIC20.51■□□□□ 0.87
BRF1Q92994 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.51■□□□□ 0.87
BRF1Q92994 MIR5100-201ENST00000579544 119 ntBASIC20.51■□□□□ 0.87
BRF1Q92994 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.51■□□□□ 0.87
BRF1Q92994 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.51■□□□□ 0.87
BRF1Q92994 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.51■□□□□ 0.87
BRF1Q92994 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.51■□□□□ 0.87
BRF1Q92994 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
BRF1Q92994 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.51■□□□□ 0.87
BRF1Q92994 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
BRF1Q92994 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.51■□□□□ 0.87
BRF1Q92994 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
BRF1Q92994 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.51■□□□□ 0.87
BRF1Q92994 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRF1Q92994 AC009336.1-201ENST00000608941 1553 ntBASIC20.51■□□□□ 0.87
BRF1Q92994 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
BRF1Q92994 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
BRF1Q92994 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
BRF1Q92994 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
BRF1Q92994 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
BRF1Q92994 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
BRF1Q92994 STK19B-204ENST00000512515 211 ntBASIC20.5■□□□□ 0.87
BRF1Q92994 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.5■□□□□ 0.87
BRF1Q92994 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.5■□□□□ 0.87
BRF1Q92994 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.5■□□□□ 0.87
BRF1Q92994 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
BRF1Q92994 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 PMPCAP1-201ENST00000508114 1576 ntBASIC20.5■□□□□ 0.87
BRF1Q92994 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.5■□□□□ 0.87
BRF1Q92994 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BRF1Q92994 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
BRF1Q92994 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
BRF1Q92994 OR6D1P-202ENST00000641007 5290 ntBASIC20.49■□□□□ 0.87
BRF1Q92994 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF1Q92994 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF1Q92994 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF1Q92994 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRF1Q92994 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF1Q92994 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms