Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 AC009336.1-201ENST00000608941 1553 ntBASIC18.55■□□□□ 0.56
DDX1Q92499 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX1Q92499 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX1Q92499 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX1Q92499 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
DDX1Q92499 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
DDX1Q92499 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
DDX1Q92499 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
DDX1Q92499 POM121L3P-201ENST00000419331 1163 ntBASIC18.55■□□□□ 0.56
DDX1Q92499 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
DDX1Q92499 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.55■□□□□ 0.56
DDX1Q92499 AC104819.1-201ENST00000504587 486 ntBASIC18.55■□□□□ 0.56
DDX1Q92499 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.55■□□□□ 0.56
DDX1Q92499 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.55■□□□□ 0.56
DDX1Q92499 AF228730.7-201ENST00000641842 219 ntBASIC18.55■□□□□ 0.56
DDX1Q92499 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX1Q92499 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX1Q92499 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 AC093525.9-201ENST00000624961 1746 ntBASIC18.54■□□□□ 0.56
DDX1Q92499 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
DDX1Q92499 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX1Q92499 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX1Q92499 AC009053.2-201ENST00000563701 2365 ntBASIC18.54■□□□□ 0.56
DDX1Q92499 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
DDX1Q92499 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX1Q92499 MRPL3P1-201ENST00000400109 1033 ntBASIC18.54■□□□□ 0.56
DDX1Q92499 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX1Q92499 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.54■□□□□ 0.56
DDX1Q92499 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.54■□□□□ 0.56
DDX1Q92499 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX1Q92499 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.54■□□□□ 0.56
DDX1Q92499 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX1Q92499 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX1Q92499 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX1Q92499 AP000867.4-201ENST00000641616 219 ntBASIC18.54■□□□□ 0.56
DDX1Q92499 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
DDX1Q92499 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
DDX1Q92499 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX1Q92499 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX1Q92499 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DDX1Q92499 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DDX1Q92499 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX1Q92499 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
DDX1Q92499 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX1Q92499 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX1Q92499 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX1Q92499 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX1Q92499 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX1Q92499 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX1Q92499 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX1Q92499 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
DDX1Q92499 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX1Q92499 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX1Q92499 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX1Q92499 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX1Q92499 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX1Q92499 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX1Q92499 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX1Q92499 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
DDX1Q92499 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX1Q92499 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DDX1Q92499 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.53■□□□□ 0.56
DDX1Q92499 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX1Q92499 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DDX1Q92499 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
DDX1Q92499 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.53■□□□□ 0.56
DDX1Q92499 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.53■□□□□ 0.56
DDX1Q92499 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.53■□□□□ 0.56
DDX1Q92499 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.53■□□□□ 0.56
DDX1Q92499 AC073592.5-201ENST00000624854 528 ntBASIC18.53■□□□□ 0.56
DDX1Q92499 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX1Q92499 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
DDX1Q92499 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
DDX1Q92499 AL135999.2-201ENST00000622438 1686 ntBASIC18.53■□□□□ 0.56
DDX1Q92499 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX1Q92499 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms