Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 HLA-F-220ENST00000434407 884 ntBASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 AC063952.2-201ENST00000498792 1227 ntBASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 AC024563.2-201ENST00000603282 481 ntBASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 PCDHB19P-201ENST00000570871 2371 ntBASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RTN4IP1Q8WWV3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RTN4IP1Q8WWV3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RTN4IP1Q8WWV3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RTN4IP1Q8WWV3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RTN4IP1Q8WWV3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RTN4IP1Q8WWV3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RTN4IP1Q8WWV3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RTN4IP1Q8WWV3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
RTN4IP1Q8WWV3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.71□□□□□ -0.06
RTN4IP1Q8WWV3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
RTN4IP1Q8WWV3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.06
RTN4IP1Q8WWV3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 AC105020.1-201ENST00000435356 2205 ntBASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 KRT89P-201ENST00000620027 1478 ntBASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 KRT18P38-201ENST00000449496 1282 ntBASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 DUX4L26-201ENST00000489078 1255 ntBASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 LINC01238-205ENST00000567549 1107 ntBASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RTN4IP1Q8WWV3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 LINC00167-201ENST00000530583 1419 ntBASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms