Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 RCN1P2-201ENST00000398357 915 ntBASIC17.68■□□□□ 0.42
PTCD2Q8WV60 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 TPM4P1-201ENST00000436100 807 ntBASIC17.68■□□□□ 0.42
PTCD2Q8WV60 KRT16P4-201ENST00000453883 522 ntBASIC17.68■□□□□ 0.42
PTCD2Q8WV60 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 AP001094.4-201ENST00000579008 2176 ntBASIC17.68■□□□□ 0.42
PTCD2Q8WV60 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.68■□□□□ 0.42
PTCD2Q8WV60 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 AC026396.1-201ENST00000419388 421 ntBASIC17.67■□□□□ 0.42
PTCD2Q8WV60 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 AC103564.2-201ENST00000432853 1299 ntBASIC17.67■□□□□ 0.42
PTCD2Q8WV60 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 IGHV3-52-201ENST00000519770 353 ntBASIC17.67■□□□□ 0.42
PTCD2Q8WV60 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 AL031008.1-201ENST00000619963 541 ntBASIC17.67■□□□□ 0.42
PTCD2Q8WV60 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCD2Q8WV60 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.66■□□□□ 0.42
PTCD2Q8WV60 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 AC019129.2-201ENST00000609837 1235 ntBASIC17.66■□□□□ 0.42
PTCD2Q8WV60 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 TP73-AS1-210ENST00000637775 1455 ntBASIC17.66■□□□□ 0.42
PTCD2Q8WV60 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCD2Q8WV60 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms