Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CT55Q8WUE5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CT55Q8WUE5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.17■□□□□ 0.18
CT55Q8WUE5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.17■□□□□ 0.18
CT55Q8WUE5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CT55Q8WUE5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CT55Q8WUE5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CT55Q8WUE5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CT55Q8WUE5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CT55Q8WUE5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CT55Q8WUE5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CT55Q8WUE5 ABALON-201ENST00000629058 1903 ntBASIC16.16■□□□□ 0.18
CT55Q8WUE5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CT55Q8WUE5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CT55Q8WUE5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 ACTG1P14-201ENST00000446382 1122 ntBASIC16.16■□□□□ 0.18
CT55Q8WUE5 AL513480.1-201ENST00000451731 511 ntBASIC16.16■□□□□ 0.18
CT55Q8WUE5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 RFPL4AP1-201ENST00000530883 850 ntBASIC16.16■□□□□ 0.18
CT55Q8WUE5 AP002472.1-201ENST00000577490 586 ntBASIC16.16■□□□□ 0.18
CT55Q8WUE5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CT55Q8WUE5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CT55Q8WUE5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CT55Q8WUE5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CT55Q8WUE5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CT55Q8WUE5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.16■□□□□ 0.18
CT55Q8WUE5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CT55Q8WUE5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 PAWRP1-201ENST00000451083 565 ntBASIC16.15■□□□□ 0.18
CT55Q8WUE5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 AC027612.4-201ENST00000605371 583 ntBASIC16.15■□□□□ 0.18
CT55Q8WUE5 ACTL9-202ENST00000612068 1252 ntBASIC16.15■□□□□ 0.18
CT55Q8WUE5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 LINC01451-201ENST00000623792 534 ntBASIC16.15■□□□□ 0.18
CT55Q8WUE5 AC092902.6-201ENST00000641783 218 ntBASIC16.15■□□□□ 0.18
CT55Q8WUE5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.15■□□□□ 0.18
CT55Q8WUE5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CT55Q8WUE5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.14■□□□□ 0.18
CT55Q8WUE5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CT55Q8WUE5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CT55Q8WUE5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CT55Q8WUE5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CT55Q8WUE5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CT55Q8WUE5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CT55Q8WUE5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CT55Q8WUE5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CT55Q8WUE5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.14■□□□□ 0.17
CT55Q8WUE5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.14■□□□□ 0.17
CT55Q8WUE5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CT55Q8WUE5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CT55Q8WUE5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CT55Q8WUE5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CT55Q8WUE5 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.14■□□□□ 0.17
CT55Q8WUE5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.14■□□□□ 0.17
CT55Q8WUE5 AC087163.2-201ENST00000457299 853 ntBASIC16.14■□□□□ 0.17
CT55Q8WUE5 CYMP-203ENST00000474680 1263 ntBASIC16.14■□□□□ 0.17
CT55Q8WUE5 SLC25A6P2-201ENST00000497974 877 ntBASIC16.14■□□□□ 0.17
CT55Q8WUE5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.14■□□□□ 0.17
CT55Q8WUE5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.14■□□□□ 0.17
CT55Q8WUE5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CT55Q8WUE5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CT55Q8WUE5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms