Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LINS1Q8NG48 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
LINS1Q8NG48 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.72■■□□□ 1.07
LINS1Q8NG48 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LINS1Q8NG48 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.72■■□□□ 1.07
LINS1Q8NG48 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
LINS1Q8NG48 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
LINS1Q8NG48 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 MRPL20P1-201ENST00000400819 433 ntBASIC21.72■■□□□ 1.07
LINS1Q8NG48 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 CRYGEP-201ENST00000412192 528 ntBASIC21.72■■□□□ 1.07
LINS1Q8NG48 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.72■■□□□ 1.07
LINS1Q8NG48 KRT18P2-201ENST00000447938 1258 ntBASIC21.72■■□□□ 1.07
LINS1Q8NG48 PAWRP1-201ENST00000451083 565 ntBASIC21.72■■□□□ 1.07
LINS1Q8NG48 RNA5SP416-201ENST00000516838 111 ntBASIC21.72■■□□□ 1.07
LINS1Q8NG48 MIR4751-201ENST00000578027 74 ntBASIC21.72■■□□□ 1.07
LINS1Q8NG48 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
LINS1Q8NG48 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.72■■□□□ 1.07
LINS1Q8NG48 AC010654.1-201ENST00000615722 808 ntBASIC21.72■■□□□ 1.07
LINS1Q8NG48 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.72■■□□□ 1.07
LINS1Q8NG48 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.72■■□□□ 1.07
LINS1Q8NG48 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.72■■□□□ 1.07
LINS1Q8NG48 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.72■■□□□ 1.07
LINS1Q8NG48 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINS1Q8NG48 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
LINS1Q8NG48 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.71■■□□□ 1.07
LINS1Q8NG48 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINS1Q8NG48 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.71■■□□□ 1.07
LINS1Q8NG48 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
LINS1Q8NG48 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.71■■□□□ 1.07
LINS1Q8NG48 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.71■■□□□ 1.07
LINS1Q8NG48 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.71■■□□□ 1.07
LINS1Q8NG48 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.71■■□□□ 1.07
LINS1Q8NG48 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.71■■□□□ 1.07
LINS1Q8NG48 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.71■■□□□ 1.07
LINS1Q8NG48 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINS1Q8NG48 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINS1Q8NG48 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINS1Q8NG48 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.71■■□□□ 1.07
LINS1Q8NG48 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINS1Q8NG48 AC016396.2-201ENST00000562575 1417 ntBASIC21.71■■□□□ 1.07
LINS1Q8NG48 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINS1Q8NG48 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
LINS1Q8NG48 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
LINS1Q8NG48 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
LINS1Q8NG48 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.7■■□□□ 1.07
LINS1Q8NG48 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.7■■□□□ 1.06
LINS1Q8NG48 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
LINS1Q8NG48 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINS1Q8NG48 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINS1Q8NG48 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.7■■□□□ 1.06
LINS1Q8NG48 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINS1Q8NG48 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LINS1Q8NG48 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINS1Q8NG48 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
LINS1Q8NG48 IGLL3P-201ENST00000412472 434 ntBASIC21.7■■□□□ 1.06
LINS1Q8NG48 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.7■■□□□ 1.06
LINS1Q8NG48 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.7■■□□□ 1.06
LINS1Q8NG48 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.7■■□□□ 1.06
LINS1Q8NG48 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINS1Q8NG48 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LINS1Q8NG48 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
LINS1Q8NG48 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
LINS1Q8NG48 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.7■■□□□ 1.06
LINS1Q8NG48 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINS1Q8NG48 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
LINS1Q8NG48 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINS1Q8NG48 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINS1Q8NG48 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.69■■□□□ 1.06
LINS1Q8NG48 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINS1Q8NG48 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LINS1Q8NG48 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.69■■□□□ 1.06
LINS1Q8NG48 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LINS1Q8NG48 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINS1Q8NG48 SLC25A1P3-201ENST00000395415 828 ntBASIC21.69■■□□□ 1.06
LINS1Q8NG48 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LINS1Q8NG48 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LINS1Q8NG48 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LINS1Q8NG48 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.69■■□□□ 1.06
LINS1Q8NG48 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.69■■□□□ 1.06
LINS1Q8NG48 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.69■■□□□ 1.06
LINS1Q8NG48 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LINS1Q8NG48 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LINS1Q8NG48 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINS1Q8NG48 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LINS1Q8NG48 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms