Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC023141.13-201ENST00000604991 943 ntBASIC21.36■■□□□ 1.01
RTL9Q8NET4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 LYSMD4-203ENST00000378904 2122 ntBASIC21.35■■□□□ 1.01
RTL9Q8NET4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL9Q8NET4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL9Q8NET4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTL9Q8NET4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 AC025580.3-201ENST00000617932 1424 ntBASIC21.35■■□□□ 1.01
RTL9Q8NET4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL9Q8NET4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTL9Q8NET4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL9Q8NET4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL9Q8NET4 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL9Q8NET4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.35■■□□□ 1.01
RTL9Q8NET4 AC027612.4-201ENST00000605371 583 ntBASIC21.35■■□□□ 1.01
RTL9Q8NET4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL9Q8NET4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL9Q8NET4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RTL9Q8NET4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.34■■□□□ 1.01
RTL9Q8NET4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL9Q8NET4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RTL9Q8NET4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL9Q8NET4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL9Q8NET4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RTL9Q8NET4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL9Q8NET4 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.34■■□□□ 1.01
RTL9Q8NET4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL9Q8NET4 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.34■■□□□ 1.01
RTL9Q8NET4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL9Q8NET4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.34■■□□□ 1.01
RTL9Q8NET4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.34■■□□□ 1.01
RTL9Q8NET4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.34■■□□□ 1.01
RTL9Q8NET4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.34■■□□□ 1.01
RTL9Q8NET4 AC007064.4-201ENST00000637740 555 ntBASIC21.34■■□□□ 1.01
RTL9Q8NET4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL9Q8NET4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL9Q8NET4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL9Q8NET4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RTL9Q8NET4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.33■■□□□ 1.01
RTL9Q8NET4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTL9Q8NET4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTL9Q8NET4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
RTL9Q8NET4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTL9Q8NET4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.33■■□□□ 1
RTL9Q8NET4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTL9Q8NET4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.33■■□□□ 1
RTL9Q8NET4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.33■■□□□ 1
RTL9Q8NET4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.33■■□□□ 1
RTL9Q8NET4 AC074386.1-202ENST00000463561 864 ntBASIC21.33■■□□□ 1
RTL9Q8NET4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
RTL9Q8NET4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.33■■□□□ 1
RTL9Q8NET4 MIR3197-201ENST00000582241 73 ntBASIC21.33■■□□□ 1
RTL9Q8NET4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.33■■□□□ 1
RTL9Q8NET4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.33■■□□□ 1
RTL9Q8NET4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTL9Q8NET4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTL9Q8NET4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.33■■□□□ 1
RTL9Q8NET4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RTL9Q8NET4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 AC133963.1-201ENST00000504166 1679 ntBASIC21.32■■□□□ 1
RTL9Q8NET4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.32■■□□□ 1
RTL9Q8NET4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RTL9Q8NET4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.32■■□□□ 1
RTL9Q8NET4 AC107918.2-201ENST00000530817 355 ntBASIC21.32■■□□□ 1
RTL9Q8NET4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.32■■□□□ 1
RTL9Q8NET4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RTL9Q8NET4 AL031432.2-201ENST00000566714 459 ntBASIC21.32■■□□□ 1
RTL9Q8NET4 AL928711.1-201ENST00000570165 459 ntBASIC21.32■■□□□ 1
RTL9Q8NET4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.32■■□□□ 1
RTL9Q8NET4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.32■■□□□ 1
RTL9Q8NET4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.32■■□□□ 1
RTL9Q8NET4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.32■■□□□ 1
RTL9Q8NET4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
RTL9Q8NET4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RTL9Q8NET4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms