Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 AC087289.5-201ENST00000586076 3175 ntBASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 MIR661-201ENST00000384842 89 ntBASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 HMGA1P7-201ENST00000406908 502 ntBASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KLHDC9Q8NEP7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 MIR943-201ENST00000401286 94 ntBASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 AC002472.2-201ENST00000442739 958 ntBASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 KLF2P3-201ENST00000451977 1087 ntBASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 RN7SL204P-201ENST00000582831 262 ntBASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 AC084121.4-201ENST00000641598 221 ntBASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 AF228730.8-201ENST00000642140 221 ntBASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
KLHDC9Q8NEP7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 AC236430.1-201ENST00000402231 743 ntBASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 RBPMS2P1-201ENST00000437762 623 ntBASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 AL161645.1-201ENST00000622716 1255 ntBASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
KLHDC9Q8NEP7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KLHDC9Q8NEP7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KLHDC9Q8NEP7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms