Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.34■□□□□ 0.53
TTC16Q8NEE8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC16Q8NEE8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC16Q8NEE8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TTC16Q8NEE8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.34■□□□□ 0.53
TTC16Q8NEE8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC16Q8NEE8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TTC16Q8NEE8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TTC16Q8NEE8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.33■□□□□ 0.53
TTC16Q8NEE8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.33■□□□□ 0.53
TTC16Q8NEE8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TTC16Q8NEE8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.33■□□□□ 0.53
TTC16Q8NEE8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.33■□□□□ 0.53
TTC16Q8NEE8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TTC16Q8NEE8 PMS2P7-201ENST00000506558 1336 ntBASIC18.33■□□□□ 0.53
TTC16Q8NEE8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TTC16Q8NEE8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TTC16Q8NEE8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TTC16Q8NEE8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.33■□□□□ 0.52
TTC16Q8NEE8 AC096633.1-201ENST00000422446 749 ntBASIC18.33■□□□□ 0.52
TTC16Q8NEE8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.33■□□□□ 0.52
TTC16Q8NEE8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.33■□□□□ 0.52
TTC16Q8NEE8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TTC16Q8NEE8 AC006538.3-201ENST00000612495 578 ntBASIC18.33■□□□□ 0.52
TTC16Q8NEE8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.33■□□□□ 0.52
TTC16Q8NEE8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TTC16Q8NEE8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TTC16Q8NEE8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TTC16Q8NEE8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.33■□□□□ 0.52
TTC16Q8NEE8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TTC16Q8NEE8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 MED15P5-201ENST00000423150 992 ntBASIC18.32■□□□□ 0.52
TTC16Q8NEE8 AC007967.2-201ENST00000432613 625 ntBASIC18.32■□□□□ 0.52
TTC16Q8NEE8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 RNA5SP415-201ENST00000517246 115 ntBASIC18.32■□□□□ 0.52
TTC16Q8NEE8 AC105339.3-201ENST00000560043 636 ntBASIC18.32■□□□□ 0.52
TTC16Q8NEE8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 AC008735.5-201ENST00000623544 497 ntBASIC18.32■□□□□ 0.52
TTC16Q8NEE8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TTC16Q8NEE8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 AC079776.2-201ENST00000641154 1609 ntBASIC18.31■□□□□ 0.52
TTC16Q8NEE8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 PMPCAP1-201ENST00000508114 1576 ntBASIC18.31■□□□□ 0.52
TTC16Q8NEE8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 AL022326.1-202ENST00000641533 845 ntBASIC18.31■□□□□ 0.52
TTC16Q8NEE8 AC107918.4-202ENST00000641623 219 ntBASIC18.31■□□□□ 0.52
TTC16Q8NEE8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC16Q8NEE8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC16Q8NEE8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms