Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 AL049757.1-201ENST00000616842 1596 ntBASIC16.85■□□□□ 0.29
KRT78Q8N1N4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 INTS4P1-201ENST00000438455 1935 ntBASIC16.85■□□□□ 0.29
KRT78Q8N1N4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT78Q8N1N4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 AC141586.5-201ENST00000624546 2050 ntBASIC16.84■□□□□ 0.29
KRT78Q8N1N4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 RCN1P2-201ENST00000398357 915 ntBASIC16.84■□□□□ 0.29
KRT78Q8N1N4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 KRT8P10-201ENST00000450021 1447 ntBASIC16.84■□□□□ 0.29
KRT78Q8N1N4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT78Q8N1N4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
KRT78Q8N1N4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT78Q8N1N4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 CROCCP2-202ENST00000412962 2773 ntBASIC16.83■□□□□ 0.28
KRT78Q8N1N4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 HCG4P8-203ENST00000443049 980 ntBASIC16.83■□□□□ 0.28
KRT78Q8N1N4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 AL353593.2-201ENST00000602529 1483 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms