Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
RGPD4Q7Z3J3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.79■■□□□ 1.08
RGPD4Q7Z3J3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RGPD4Q7Z3J3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 AC087499.5-201ENST00000452760 1342 ntBASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 TMEM14DP-201ENST00000422205 345 ntBASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 AL353732.1-201ENST00000569618 1459 ntBASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RGPD4Q7Z3J3 AC007952.6-201ENST00000573168 2673 ntBASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 AC003957.1-201ENST00000625108 2673 ntBASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 AC126763.1-201ENST00000552015 2118 ntBASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 KRT223P-202ENST00000449164 1292 ntBASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 AC073389.1-201ENST00000595595 795 ntBASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 AC073592.3-201ENST00000625118 1834 ntBASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.77■■□□□ 1.08
RGPD4Q7Z3J3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RGPD4Q7Z3J3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RGPD4Q7Z3J3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RGPD4Q7Z3J3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.77■■□□□ 1.07
RGPD4Q7Z3J3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.77■■□□□ 1.07
RGPD4Q7Z3J3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RGPD4Q7Z3J3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RGPD4Q7Z3J3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.75■■□□□ 1.07
RGPD4Q7Z3J3 SLC7A15P-201ENST00000424028 1363 ntBASIC21.75■■□□□ 1.07
RGPD4Q7Z3J3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RGPD4Q7Z3J3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RGPD4Q7Z3J3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RGPD4Q7Z3J3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RGPD4Q7Z3J3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.75■■□□□ 1.07
RGPD4Q7Z3J3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC21.75■■□□□ 1.07
RGPD4Q7Z3J3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC21.75■■□□□ 1.07
RGPD4Q7Z3J3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RGPD4Q7Z3J3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
RGPD4Q7Z3J3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.75■■□□□ 1.07
RGPD4Q7Z3J3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 BTBD7P1-201ENST00000447253 1453 ntBASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 AP3S2-216ENST00000617003 1561 ntBASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RGPD4Q7Z3J3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms