Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 REXO1L11P-201ENST00000620964 1927 ntBASIC13.21□□□□□ -0.29
MRPL54Q6P161 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 AC006015.1-201ENST00000429970 570 ntBASIC13.21□□□□□ -0.29
MRPL54Q6P161 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 MCCD1P1-208ENST00000445732 328 ntBASIC13.21□□□□□ -0.29
MRPL54Q6P161 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 SOX15-203ENST00000570788 1093 ntBASIC13.21□□□□□ -0.29
MRPL54Q6P161 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 AC008687.6-201ENST00000596318 630 ntBASIC13.21□□□□□ -0.29
MRPL54Q6P161 AC092118.2-201ENST00000613495 667 ntBASIC13.21□□□□□ -0.29
MRPL54Q6P161 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 HLA-B-256ENST00000639848 1089 ntBASIC13.21□□□□□ -0.29
MRPL54Q6P161 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.21□□□□□ -0.29
MRPL54Q6P161 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL54Q6P161 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL54Q6P161 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL54Q6P161 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL54Q6P161 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.21□□□□□ -0.3
MRPL54Q6P161 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL54Q6P161 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL54Q6P161 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.21□□□□□ -0.3
MRPL54Q6P161 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL54Q6P161 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL54Q6P161 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.21□□□□□ -0.3
MRPL54Q6P161 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.21□□□□□ -0.3
MRPL54Q6P161 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL54Q6P161 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL54Q6P161 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL54Q6P161 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL54Q6P161 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL54Q6P161 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 AC016396.2-201ENST00000562575 1417 ntBASIC13.2□□□□□ -0.3
MRPL54Q6P161 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL54Q6P161 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
MRPL54Q6P161 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms