Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDCP2Q5VXM1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CDCP2Q5VXM1 NEFHP1-201ENST00000412845 2629 ntBASIC16.46■□□□□ 0.22
CDCP2Q5VXM1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CDCP2Q5VXM1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDCP2Q5VXM1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.46■□□□□ 0.22
CDCP2Q5VXM1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 TNXA-203ENST00000507684 2038 ntBASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 KRT8P48-201ENST00000515599 1220 ntBASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 RNA5SP421-201ENST00000516864 134 ntBASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 Z92544.3-201ENST00000624747 417 ntBASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 AL645728.2-201ENST00000641974 660 ntBASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.45■□□□□ 0.22
CDCP2Q5VXM1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 SPDYE11-202ENST00000450699 704 ntBASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 DUX4L27-201ENST00000554796 1261 ntBASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 SPDYE9P-201ENST00000570642 692 ntBASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 SPDYE10P-202ENST00000612005 668 ntBASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 SPDYE8P-202ENST00000612377 668 ntBASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 AC046185.3-201ENST00000623228 1824 ntBASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 KRT18P55-202ENST00000578578 1546 ntBASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDCP2Q5VXM1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDCP2Q5VXM1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDCP2Q5VXM1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms