Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
RBM3P98179 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
RBM3P98179 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RBM3P98179 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RBM3P98179 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RBM3P98179 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RBM3P98179 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RBM3P98179 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.02□□□□□ -0.65
RBM3P98179 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC11.02□□□□□ -0.65
RBM3P98179 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RBM3P98179 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC11.02□□□□□ -0.65
RBM3P98179 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.02□□□□□ -0.65
RBM3P98179 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
RBM3P98179 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RBM3P98179 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 AC016396.2-201ENST00000562575 1417 ntBASIC11.01□□□□□ -0.65
RBM3P98179 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.01□□□□□ -0.65
RBM3P98179 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.01□□□□□ -0.65
RBM3P98179 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RBM3P98179 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.01□□□□□ -0.65
RBM3P98179 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
RBM3P98179 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC11.01□□□□□ -0.65
RBM3P98179 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC11.01□□□□□ -0.65
RBM3P98179 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RBM3P98179 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC11.01□□□□□ -0.65
RBM3P98179 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RBM3P98179 CYP2T1P-201ENST00000432607 1285 ntBASIC11.01□□□□□ -0.65
RBM3P98179 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC11.01□□□□□ -0.65
RBM3P98179 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC11.01□□□□□ -0.65
RBM3P98179 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC11.01□□□□□ -0.65
RBM3P98179 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC11.01□□□□□ -0.65
RBM3P98179 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.01□□□□□ -0.65
RBM3P98179 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.01□□□□□ -0.65
RBM3P98179 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
RBM3P98179 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
RBM3P98179 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 PAUPAR-201ENST00000630360 2965 ntBASIC11.01□□□□□ -0.65
RBM3P98179 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
RBM3P98179 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RBM3P98179 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC11□□□□□ -0.65
RBM3P98179 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
RBM3P98179 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RBM3P98179 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
RBM3P98179 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC11□□□□□ -0.65
RBM3P98179 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11□□□□□ -0.65
RBM3P98179 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RBM3P98179 TREX2-204ENST00000370212 861 ntTSL 5 BASIC11□□□□□ -0.65
RBM3P98179 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
RBM3P98179 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RBM3P98179 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC11□□□□□ -0.65
RBM3P98179 PRSS44-201ENST00000515154 1146 ntBASIC11□□□□□ -0.65
RBM3P98179 PLD4-205ENST00000553861 667 ntTSL 2 BASIC11□□□□□ -0.65
RBM3P98179 RGMA-211ENST00000557420 989 ntTSL 3 BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms